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秃鹫枝槽绦虫(扁形动物门:副裸头科)的线粒体全基因组:基因排列及与其他绦虫的系统发育关系

The complete mitochondrial genome of the tapeworm Cladotaenia vulturi (Cestoda: Paruterinidae): gene arrangement and phylogenetic relationships with other cestodes.

作者信息

Guo Aijiang

机构信息

State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, 730046, Gansu Province, People's Republic of China.

Jiangsu Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou, 225009, Jiangsu Province, People's Republic of China.

出版信息

Parasit Vectors. 2016 Aug 31;9(1):475. doi: 10.1186/s13071-016-1769-x.

Abstract

BACKGROUND

Tapeworms Cladotaenia spp. are among the most important wildlife pathogens in birds of prey. The genus Cladotaenia is placed in the family Paruterinidae based on morphological characteristics and hosts. However, limited molecular information is available for studying the phylogenetic position of this genus in relation to other cestodes.

METHODS

In this study, the complete mitochondrial (mt) genome of Cladotaenia vulturi was amplified using "Long-PCR" and then sequenced by primer walking. Sequence annotation and gene identification were performed by comparison with published flatworm mt genomes. The phylogenetic relationships of C. vulturi with other cestode species were established using the concatenated amino acid sequences of 12 protein-coding genes with Bayesian Inference and Maximum Likelihood methods.

RESULTS

The complete mitochondrial genome of the Cladotaenia vulturi is 13,411 kb in size and contains 36 genes. The gene arrangement of C. vulturi is identical to those in Anoplocephala spp. (Anoplocephalidae), Hymenolepis spp. (Hymenolepididae) and Dipylidium caninum (Dipylidiidae), but different from that in taeniids owing to the order shift between the tRNA (L1) and tRNA (S2) genes. Phylogenetic analyses based on the amino acid sequences of the concatenated 12 protein-coding genes showed that the species in the Taeniidae form a group and C. vulturi is a sister taxon to the species of the family Taeniidae.

CONCLUSIONS

To our knowledge, the present study provides the first molecular data to support the early proposal from morphological evidence that the Taeniidae is a sister group to the family Paruterinidae. This novel mt genome sequence will be useful for further investigations into the population genetics, phylogenetics and systematics of the family Paruterinidae and inferring phylogenetic relationships among several lineages within the order Cyclophyllidea.

摘要

背景

绦虫克氏绦虫属(Cladotaenia spp.)是猛禽中最重要的野生动物病原体之一。基于形态特征和宿主,克氏绦虫属被归入副子宫科(Paruterinidae)。然而,关于该属与其他绦虫的系统发育位置的分子信息有限。

方法

在本研究中,使用“长PCR”扩增了秃鹫克氏绦虫(Cladotaenia vulturi)的完整线粒体(mt)基因组,然后通过引物步移法进行测序。通过与已发表的扁虫mt基因组进行比较,进行序列注释和基因鉴定。使用12个蛋白质编码基因的串联氨基酸序列,通过贝叶斯推断和最大似然法建立了秃鹫克氏绦虫与其他绦虫物种的系统发育关系。

结果

秃鹫克氏绦虫的完整线粒体基因组大小为13,411 kb,包含36个基因。秃鹫克氏绦虫的基因排列与无钩绦虫属(Anoplocephala spp.,无钩绦虫科)、膜壳绦虫属(Hymenolepis spp.,膜壳绦虫科)和犬复孔绦虫(Dipylidium caninum,复孔绦虫科)相同,但由于tRNA(L1)和tRNA(S2)基因之间的顺序变化,与带绦虫科不同。基于12个串联蛋白质编码基因的氨基酸序列的系统发育分析表明,带绦虫科的物种形成一个类群,秃鹫克氏绦虫是带绦虫科物种的姐妹分类单元。

结论

据我们所知,本研究提供了首个分子数据,以支持基于形态学证据的早期提议,即带绦虫科是副子宫科的姐妹类群。这个新的mt基因组序列将有助于进一步研究副子宫科的群体遗传学、系统发育学和分类学,并推断圆叶目内几个谱系之间的系统发育关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7495/5006517/529ad1863848/13071_2016_1769_Fig1_HTML.jpg

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