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基于颗粒的寡核苷酸和寡肽微阵列

Particle-Based Microarrays of Oligonucleotides and Oligopeptides.

作者信息

Nesterov-Mueller Alexander, Maerkle Frieder, Hahn Lothar, Foertsch Tobias, Schillo Sebastian, Bykovskaya Valentina, Sedlmayr Martyna, Weber Laura K, Ridder Barbara, Soehindrijo Miriam, Muenster Bastian, Striffler Jakob, Bischoff F Ralf, Breitling Frank, Loeffler Felix F

机构信息

Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany.

German Cancer Research Center, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany.

出版信息

Microarrays (Basel). 2014 Oct 28;3(4):245-62. doi: 10.3390/microarrays3040245.

Abstract

In this review, we describe different methods of microarray fabrication based on the use of micro-particles/-beads and point out future tendencies in the development of particle-based arrays. First, we consider oligonucleotide bead arrays, where each bead is a carrier of one specific sequence of oligonucleotides. This bead-based array approach, appearing in the late 1990s, enabled high-throughput oligonucleotide analysis and had a large impact on genome research. Furthermore, we consider particle-based peptide array fabrication using combinatorial chemistry. In this approach, particles can directly participate in both the synthesis and the transfer of synthesized combinatorial molecules to a substrate. Subsequently, we describe in more detail the synthesis of peptide arrays with amino acid polymer particles, which imbed the amino acids inside their polymer matrix. By heating these particles, the polymer matrix is transformed into a highly viscous gel, and thereby, imbedded monomers are allowed to participate in the coupling reaction. Finally, we focus on combinatorial laser fusing of particles for the synthesis of high-density peptide arrays. This method combines the advantages of particles and combinatorial lithographic approaches.

摘要

在本综述中,我们描述了基于使用微粒/微珠的微阵列制造的不同方法,并指出了基于颗粒的阵列开发的未来趋势。首先,我们考虑寡核苷酸珠阵列,其中每个珠子是一种特定寡核苷酸序列的载体。这种基于珠子的阵列方法出现在20世纪90年代末,实现了高通量寡核苷酸分析,并对基因组研究产生了重大影响。此外,我们考虑使用组合化学的基于颗粒的肽阵列制造。在这种方法中,颗粒可以直接参与合成以及将合成的组合分子转移到基质上。随后,我们更详细地描述了用氨基酸聚合物颗粒合成肽阵列的过程,这些颗粒将氨基酸嵌入其聚合物基质中。通过加热这些颗粒,聚合物基质转变为高粘性凝胶,从而使嵌入的单体能够参与偶联反应。最后,我们专注于用于合成高密度肽阵列的颗粒组合激光熔合。该方法结合了颗粒和组合光刻方法的优点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5bf2/4979057/5a51d662dd2e/microarrays-03-00245-g001.jpg

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