Lv Yangyong, Zhang Shuaibing, Wang Jinshui, Hu Yuansen
College of Biological Engineering, Henan University of Technology, Zhengzhou, China.
PLoS One. 2016 Sep 15;11(9):e0162851. doi: 10.1371/journal.pone.0162851. eCollection 2016.
Wheat (Triticum aestivum L.) is an important crop worldwide. The physiological deterioration of seeds during storage and seed priming is closely associated with germination, and thus contributes to plant growth and subsequent grain yields. In this study, wheat seeds during different stages of artificial ageing (45°C; 50% relative humidity; 98%, 50%, 20%, and 1% Germination rates) and priming (hydro-priming treatment) were subjected to proteomics analysis through a proteomic approach based on the isobaric tandem mass tag labeling. A total of 162 differentially expressed proteins (DEPs) mainly involved in metabolism, energy supply, and defense/stress responses, were identified during artificial ageing and thus validated previous physiological and biochemical studies. These DEPs indicated that the inability to protect against ageing leads to the incremental decomposition of the stored substance, impairment of metabolism and energy supply, and ultimately resulted in seed deterioration. Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that the up-regulated proteins involved in seed ageing were mainly enriched in ribosome, whereas the down-regulated proteins were mainly accumulated in energy supply (starch and sucrose metabolism) and stress defense (ascorbate and aldarate metabolism). Proteins, including hemoglobin 1, oleosin, agglutinin, and non-specific lipid-transfer proteins, were first identified in aged seeds and might be regarded as new markers of seed deterioration. Of the identified proteins, 531 DEPs were recognized during seed priming compared with unprimed seeds. In contrast to the up-regulated DEPs in seed ageing, several up-regulated DEPs in priming were involved in energy supply (tricarboxylic acid cycle, glycolysis, and fatty acid oxidation), anabolism (amino acids, and fatty acid synthesis), and cell growth/division. KEGG and protein-protein interaction analysis indicated that the up-regulated proteins in seed priming were mainly enriched in amino acid synthesis, stress defense (plant-pathogen interactions, and ascorbate and aldarate metabolism), and energy supply (oxidative phosphorylation and carbon metabolism). Therefore, DEPs associated with seed ageing and priming can be used to characterize seed vigor and optimize germination enhancement treatments. This work reveals new proteomic insights into protein changes that occur during seed deterioration and priming.
小麦(Triticum aestivum L.)是全球重要的农作物。种子在储存和引发过程中的生理劣变与萌发密切相关,进而影响植株生长及后续的谷物产量。在本研究中,通过基于等压串联质量标签标记的蛋白质组学方法,对处于人工老化不同阶段(45°C;50%相对湿度;发芽率分别为98%、50%、20%和1%)以及引发处理(水引发处理)的小麦种子进行了蛋白质组学分析。共鉴定出162个差异表达蛋白(DEPs),主要涉及代谢、能量供应和防御/应激反应,从而验证了先前的生理生化研究。这些DEPs表明,无法抵御老化会导致储存物质的逐渐分解、代谢和能量供应受损,最终导致种子劣变。京都基因与基因组百科全书(KEGG)分析显示,参与种子老化的上调蛋白主要富集在核糖体中,而下调蛋白主要积累在能量供应(淀粉和蔗糖代谢)和应激防御(抗坏血酸和醛糖代谢)中。包括血红蛋白1、油质蛋白、凝集素和非特异性脂质转运蛋白在内的蛋白质首次在老化种子中被鉴定出来,可能被视为种子劣变的新标记。在已鉴定的蛋白质中,与未引发种子相比,种子引发过程中有531个DEPs被识别。与种子老化中上调的DEPs不同,引发过程中一些上调的DEPs参与能量供应(三羧酸循环、糖酵解和脂肪酸氧化)、合成代谢(氨基酸和脂肪酸合成)以及细胞生长/分裂。KEGG和蛋白质-蛋白质相互作用分析表明,种子引发过程中上调的蛋白质主要富集在氨基酸合成、应激防御(植物-病原体相互作用以及抗坏血酸和醛糖代谢)和能量供应(氧化磷酸化和碳代谢)中。因此,与种子老化和引发相关的DEPs可用于表征种子活力并优化发芽增强处理。这项工作揭示了关于种子劣变和引发过程中蛋白质变化的新蛋白质组学见解。