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一种可调谐局部场电位计算机模拟器,用于评估相位-幅度交叉频域耦合估计的最小要求。

A tunable local field potentials computer simulator to assess minimal requirements for phase-amplitude cross-frequency-coupling estimation.

机构信息

a Department of Information Engineering , University of Padova , Padova , Italy.

b NeuroChip Laboratory, Department of Biomedical Sciences , University of Padova , Padova , Italy.

出版信息

Network. 2016;27(4):268-288. doi: 10.1080/0954898X.2016.1213440. Epub 2016 Aug 11.

Abstract

The quantitative study of cross-frequency coupling (CFC) is a relevant issue in neuroscience. In local field potentials (LFPs), measured either in the cortex or in the hippocampus, how γ-oscillation amplitude is modulated by changes in θ-rhythms-phase is thought to be important in memory formation. Several methods were proposed to quantify CFC, but reported evidence suggests that experimental parameters affect the results. Therefore, a simulation tool to support the determination of minimal requirements for CFC estimation in order to obtain reliable results is particularly useful. An approach to generate computer-simulated signals having CFC intensity, sweep duration, signal-to-noise ratio (SNR), and multiphasic-coupling tunable by the user has been developed. Its utility has been proved by a study evaluating minimal sweep duration and SNR required for reliable θ-γ CFC estimation from signals simulating LFP measured in the mouse hippocampus. A MATLAB® software was made available to facilitate methodology reproducibility. The analysis of the synthetic LFPs created by the simulator shows how the minimal sweep duration for achieving accurate θ-γ CFC estimates increases as SNR decreases and the number of CFC levels to discriminate increases. In particular, a sufficient reliability in discriminating five different predetermined CFC levels is reached with 35-s sweep with SNR = 20, while SNR = 5 requires at least 140-s sweep.

摘要

跨频率耦合 (CFC) 的定量研究是神经科学中的一个重要问题。在局部场电位 (LFP) 中,无论是在皮层还是海马体中测量,γ 振荡幅度如何随 θ 节律相位的变化而调制被认为对记忆形成很重要。已经提出了几种量化 CFC 的方法,但报告的证据表明,实验参数会影响结果。因此,一个模拟工具来支持确定 CFC 估计的最小要求,以获得可靠的结果是特别有用的。已经开发了一种方法来生成具有 CFC 强度、扫频持续时间、信号噪声比 (SNR) 和多相耦合的计算机模拟信号,用户可以对其进行调整。通过一项研究评估了从模拟海马体 LFP 测量的信号中进行可靠的 θ-γ CFC 估计所需的最小扫频持续时间和 SNR,证明了其有用性。为了便于方法重现性,已经制作了一个 MATLAB®软件。通过对模拟器创建的合成 LFP 的分析,我们可以了解到,为了实现准确的 θ-γ CFC 估计,最小扫频持续时间随着 SNR 的降低和要区分的 CFC 水平数量的增加而增加。特别是,在 SNR = 20 时,使用 35 秒的扫频可以达到区分五个不同预定 CFC 水平的足够可靠性,而 SNR = 5 则需要至少 140 秒的扫频。

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