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通过固态 NMR 和分子动力学模拟探测二氧化硅-生物分子相互作用。

Probing Silica-Biomolecule Interactions by Solid-State NMR and Molecular Dynamics Simulations.

机构信息

Chair for Bioanalytical Chemistry, Department of Chemistry and Food Chemistry, TU Dresden , 01062 Dresden, Germany.

Institute for Materials Science and Max Bergmann Center of Biomaterials, TU Dresden , 01062 Dresden, Germany.

出版信息

Langmuir. 2016 Nov 8;32(44):11698-11705. doi: 10.1021/acs.langmuir.6b03311. Epub 2016 Oct 25.

DOI:10.1021/acs.langmuir.6b03311
PMID:27759396
Abstract

Understanding the molecular interactions between inorganic phases such as silica and organic material is fundamental for chromatographic applications, for tailoring silica-enzyme interactions, and for elucidating the mechanisms of biomineralization. The formation, structure, and properties of the organic/inorganic interface is crucial in this context. Here, we investigate the interaction of selectively C-labeled choline with Si-labeled monosilicic acid/silica at the molecular level. Silica/choline nanocomposites were analyzed by solid-state NMR spectroscopy in combination with extended molecular dynamics (MD) simulations to understand the silica/organic interface. Cross-polarization magic angle spinning (CP MAS)-based NMR experiments like H-C CP-REDOR (rotational-echo double resonance), H-C HETCOR (heteronuclear correlation), and H-Si-H double CP are employed to determine spatial parameters. The measurement of Si-C internuclear distances for selectively C-labeled choline provides an experimental parameter that allows the direct verification of MD simulations. Atomistic modeling using classical MD methodologies is performed using the INTERFACE force field. The modeling results are in excellent agreement with the experimental data and reveal the relevant molecular conformations as well as the nature and interplay of the interactions between the choline cation and the silica surface. Electrostatic interactions and hydrogen bonding are both important and depend strongly on the hydration level as well as the charge state of the silica surface.

摘要

理解无机相(如二氧化硅)和有机材料之间的分子相互作用对于色谱应用、定制硅酶相互作用以及阐明生物矿化机制至关重要。在这方面,有机/无机界面的形成、结构和性质至关重要。在这里,我们在分子水平上研究了选择性 C 标记的胆碱与 Si 标记的单硅酸/二氧化硅的相互作用。通过固态 NMR 光谱学与扩展分子动力学 (MD) 模拟相结合来分析二氧化硅/胆碱纳米复合材料,以了解二氧化硅/有机界面。交叉极化魔角旋转 (CPMAS) 基 NMR 实验,如 H-C CP-REDOR(旋转回波双共振)、H-C HETCOR(异核相关)和 H-Si-H 双 CP,用于确定空间参数。对选择性 C 标记的胆碱进行 Si-C 核间距测量提供了一个实验参数,可直接验证 MD 模拟。使用经典 MD 方法学的原子建模使用 INTERFACE 力场进行。建模结果与实验数据非常吻合,揭示了相关的分子构象以及胆碱阳离子与二氧化硅表面之间相互作用的性质和相互作用。静电相互作用和氢键都很重要,并且强烈依赖于水合水平以及二氧化硅表面的电荷状态。

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