Lien Pham Thi Kim, Izumikawa Keiichi, Muroi Kei, Irie Kaoru, Suda Yasuyuki, Irie Kenji
Department of Molecular Cell Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Ibaraki, Japan.
Global Innovation Research Organization, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, Japan.
PLoS One. 2016 Oct 24;11(10):e0164773. doi: 10.1371/journal.pone.0164773. eCollection 2016.
Scd6, a yeast homologue of human RAP55, is a component of messenger ribonucleoproteins (mRNPs) that repress translation by binding to translation initiation factors, and also is a decapping activator along with the binding partners Edc3 and Dhh1. Herein, we report that Scd6 is a substrate of the intrinsic protein arginine methyltransferase, Hmt1, in budding yeast Saccharomyces cerevisiae. Mass spectrometric analysis revealed that several arginine residues within the Scd6 RGG motif, which is important for mRNA binding, were methylated in Hmt1 dependent manner. Under stress conditions such as glucose starvation, Scd6 localized to cytoplasmic processing bodies (P-bodies) wherein translationally repressed mRNPs and untranslated mRNAs accumulate. Localization of Scd6 to P-bodies was impaired in hmt1 deletion mutant and in the presence of methylation-deficient substitution of Scd6. In addition, deletion of scd6 and dhh1 led to severe synthetic growth defect at high temperature. Methylation-deficient mutation of Scd6 suppressed the phenotypic defects of scd6 dhh1 double mutant, whereas methylation-mimic mutation did not, suggesting that the arginine methylation might negatively regulate Scd6 function relating to Dhh1. Therefore, the present data suggest that Hmt1-based arginine methylation is required for Scd6 localization and function.
Scd6是人类RAP55的酵母同源物,是信使核糖核蛋白(mRNP)的一个组成部分,通过与翻译起始因子结合来抑制翻译,并且与结合伴侣Edc3和Dhh1一起也是一种脱帽激活剂。在此,我们报道Scd6是出芽酵母酿酒酵母中内在蛋白质精氨酸甲基转移酶Hmt1的底物。质谱分析显示,Scd6的RGG基序内对mRNA结合很重要的几个精氨酸残基以Hmt1依赖的方式被甲基化。在葡萄糖饥饿等应激条件下,Scd6定位于细胞质加工体(P小体),其中翻译受抑制的mRNP和未翻译的mRNA会积累。在hmt1缺失突变体以及存在Scd6甲基化缺陷替代物的情况下,Scd6向P小体的定位受损。此外,scd6和dhh1的缺失导致在高温下严重的合成生长缺陷。Scd6的甲基化缺陷突变抑制了scd6 dhh1双突变体的表型缺陷,而甲基化模拟突变则没有,这表明精氨酸甲基化可能对与Dhh1相关的Scd6功能起负调控作用。因此,目前的数据表明基于Hmt1的精氨酸甲基化是Scd6定位和功能所必需的。