• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于宿主的外周血基因表达分析在传染病诊断中的应用

Host-Based Peripheral Blood Gene Expression Analysis for Diagnosis of Infectious Diseases.

作者信息

Holcomb Zachary E, Tsalik Ephraim L, Woods Christopher W, McClain Micah T

机构信息

Duke University School of Medicine, Duke University, Durham, North Carolina, USA.

Center for Applied Genomics and Precision Medicine, Duke University, Durham, North Carolina, USA.

出版信息

J Clin Microbiol. 2017 Feb;55(2):360-368. doi: 10.1128/JCM.01057-16. Epub 2016 Oct 19.

DOI:10.1128/JCM.01057-16
PMID:27795332
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5277504/
Abstract

Emerging pandemic infectious threats, inappropriate antibacterial use contributing to multidrug resistance, and increased morbidity and mortality from diagnostic delays all contribute to a need for improved diagnostics in the field of infectious diseases. Historically, diagnosis of infectious diseases has relied on pathogen detection; however, a novel concept to improve diagnostics in infectious diseases relies instead on the detection of changes in patterns of gene expression in circulating white blood cells in response to infection. Alterations in peripheral blood gene expression in the infected state are robust and reproducible, yielding diagnostic and prognostic information to help facilitate patient treatment decisions.

摘要

新出现的大流行性传染病威胁、导致多重耐药性的不适当抗菌药物使用,以及诊断延迟导致的发病率和死亡率增加,都促使人们需要改进传染病领域的诊断方法。从历史上看,传染病的诊断依赖于病原体检测;然而,一种改进传染病诊断的新概念则依赖于检测循环白细胞中基因表达模式因感染而发生的变化。感染状态下外周血基因表达的改变是强烈且可重复的,可提供诊断和预后信息,以帮助促进患者的治疗决策。

相似文献

1
Host-Based Peripheral Blood Gene Expression Analysis for Diagnosis of Infectious Diseases.基于宿主的外周血基因表达分析在传染病诊断中的应用
J Clin Microbiol. 2017 Feb;55(2):360-368. doi: 10.1128/JCM.01057-16. Epub 2016 Oct 19.
2
Transcriptional profiling in infectious diseases: ready for prime time?传染病中的转录组学分析:是否已准备好投入实际应用?
J Infect. 2014 Jan;68 Suppl 1:S94-9. doi: 10.1016/j.jinf.2013.09.018. Epub 2013 Oct 16.
3
Detecting specific infections in children through host responses: a paradigm shift.通过宿主反应检测儿童特定感染:一种范式转变。
Curr Opin Infect Dis. 2014 Jun;27(3):228-35. doi: 10.1097/QCO.0000000000000065.
4
[Microarray-based transcriptome analyses in infectious diseases. A new diagnostic method].[基于微阵列的传染病转录组分析。一种新的诊断方法]
Internist (Berl). 2006 Jun;47 Suppl 1:S6, S8-13. doi: 10.1007/s00108-006-1627-6.
5
A technological update of molecular diagnostics for infectious diseases.传染病分子诊断技术的更新
Infect Disord Drug Targets. 2008 Sep;8(3):183-8. doi: 10.2174/1871526510808030183.
6
Unmet diagnostic needs in infectious disease.传染病领域未满足的诊断需求。
Diagn Microbiol Infect Dis. 2015 Jan;81(1):57-9. doi: 10.1016/j.diagmicrobio.2014.10.005. Epub 2014 Oct 25.
7
What was old is new again: using the host response to diagnose infectious disease.旧物新用:利用宿主反应诊断传染病。
Expert Rev Mol Diagn. 2015;15(9):1143-58. doi: 10.1586/14737159.2015.1059278. Epub 2015 Jul 4.
8
The host response as a tool for infectious disease diagnosis and management.宿主反应作为传染病诊断和管理的工具。
Expert Rev Mol Diagn. 2018 Aug;18(8):723-738. doi: 10.1080/14737159.2018.1493378. Epub 2018 Jul 2.
9
Emerging technologies in point-of-care molecular diagnostics for resource-limited settings.即时检测分子诊断的新兴技术在资源有限环境下的应用。
Expert Rev Mol Diagn. 2014 Jun;14(5):525-34. doi: 10.1586/14737159.2014.915748. Epub 2014 May 2.
10
[Molecular diagnostics of infectious diseases for the ambulatory practice].[用于门诊实践的传染病分子诊断]
Rev Med Suisse. 2014 Oct 8;10(445):1866-70.

引用本文的文献

1
Direct single cell-type gene expression analysis in peripheral blood: novel ratio-based gene expression biomarkers using 2 novel monocyte reference genes (PSAP and CTSS) for detection of bacterial infection.外周血中直接单细胞类型基因表达分析:使用2种新型单核细胞参考基因(PSAP和CTSS)检测细菌感染的基于新型比率的基因表达生物标志物。
Hum Mol Genet. 2025 Aug 21;34(17):1458-1470. doi: 10.1093/hmg/ddaf103.
2
Youth Who Control HIV on Antiretroviral Therapy Display Unique Plasma Biomarkers and Cellular Transcriptome Profiles Including DNA Repair and RNA Processing.接受抗逆转录病毒治疗后控制HIV的青年表现出独特的血浆生物标志物和细胞转录组特征,包括DNA修复和RNA加工。
Cells. 2025 Feb 15;14(4):285. doi: 10.3390/cells14040285.
3
Impact of Viral Lower Respiratory Tract Infection (LRTI) in Early Childhood (0-2 Years) on Lung Growth and Development and Lifelong Trajectories of Pulmonary Health: A National Institutes of Health (NIH) Workshop Summary.幼儿期(0 - 2岁)病毒性下呼吸道感染(LRTI)对肺生长发育及肺部健康终身轨迹的影响:美国国立卫生研究院(NIH)研讨会总结
Pediatr Pulmonol. 2025 Jan;60(1):e27357. doi: 10.1002/ppul.27357. Epub 2024 Nov 20.
4
Harnessing the host response for precision infectious disease diagnosis.利用宿主反应进行精准传染病诊断。
Clin Microbiol Rev. 2024 Dec 10;37(4):e0007824. doi: 10.1128/cmr.00078-24. Epub 2024 Oct 15.
5
Deep learning model to discriminate diverse infection types based on pairwise analysis of host gene expression.基于宿主基因表达成对分析的深度学习模型,用于区分不同感染类型。
iScience. 2024 May 7;27(6):109908. doi: 10.1016/j.isci.2024.109908. eCollection 2024 Jun 21.
6
A machine learning classifier using 33 host immune response mRNAs accurately distinguishes viral and non-viral acute respiratory illnesses in nasal swab samples.一种使用 33 种宿主免疫反应信使 RNA 的机器学习分类器可准确区分鼻拭子样本中的病毒和非病毒急性呼吸道疾病。
Genome Med. 2023 Aug 28;15(1):64. doi: 10.1186/s13073-023-01216-0.
7
Advances in point-of-care genetic testing for personalized medicine applications.用于个性化医疗应用的即时护理基因检测进展。
Biomicrofluidics. 2023 May 3;17(3):031501. doi: 10.1063/5.0143311. eCollection 2023 May.
8
Benchmarking transcriptional host response signatures for infection diagnosis.用于感染诊断的转录本宿主反应特征的基准测试。
Cell Syst. 2022 Dec 21;13(12):974-988.e7. doi: 10.1016/j.cels.2022.11.007.
9
Performance Evaluation of Host Biomarker Combinations for the Diagnosis of Serious Bacterial Infection in Young Febrile Children: A Double-Blind, Multicentre, Observational Study.用于诊断发热幼儿严重细菌感染的宿主生物标志物组合的性能评估:一项双盲、多中心、观察性研究。
J Clin Med. 2022 Nov 4;11(21):6563. doi: 10.3390/jcm11216563.
10
Use of Host Response to Refine the Diagnosis of Group A Streptococcal Pharyngitis.利用宿主反应来完善 A 组链球菌性咽炎的诊断。
J Pediatric Infect Dis Soc. 2022 Dec 5;11(11):482-491. doi: 10.1093/jpids/piac072.

本文引用的文献

1
A blood RNA signature for tuberculosis disease risk: a prospective cohort study.一种用于结核病患病风险的血液RNA特征:一项前瞻性队列研究。
Lancet. 2016 Jun 4;387(10035):2312-2322. doi: 10.1016/S0140-6736(15)01316-1. Epub 2016 Mar 24.
2
Host gene expression classifiers diagnose acute respiratory illness etiology.宿主基因表达分类器可诊断急性呼吸道疾病的病因。
Sci Transl Med. 2016 Jan 20;8(322):322ra11. doi: 10.1126/scitranslmed.aad6873.
3
A Molecular Host Response Assay to Discriminate Between Sepsis and Infection-Negative Systemic Inflammation in Critically Ill Patients: Discovery and Validation in Independent Cohorts.一种用于区分重症患者脓毒症与感染阴性全身炎症反应的分子宿主反应检测方法:在独立队列中的发现与验证
PLoS Med. 2015 Dec 8;12(12):e1001916. doi: 10.1371/journal.pmed.1001916. eCollection 2015 Dec.
4
Circulating biomarkers for discrimination between aseptic joint failure, low-grade infection, and high-grade septic failure.用于鉴别无菌性关节失败、低级别感染和高级别感染性失败的循环生物标志物。
Clin Infect Dis. 2015 Aug 1;61(3):332-41. doi: 10.1093/cid/civ286. Epub 2015 Apr 13.
5
Superiority of transcriptional profiling over procalcitonin for distinguishing bacterial from viral lower respiratory tract infections in hospitalized adults.转录谱分析在区分住院成人细菌性与病毒性下呼吸道感染方面优于降钙素原。
J Infect Dis. 2015 Jul 15;212(2):213-22. doi: 10.1093/infdis/jiv047. Epub 2015 Jan 29.
6
Whole blood gene expression profiles to assess pathogenesis and disease severity in infants with respiratory syncytial virus infection.评估呼吸道合胞病毒感染婴儿发病机制和疾病严重程度的全血基因表达谱。
PLoS Med. 2013 Nov;10(11):e1001549. doi: 10.1371/journal.pmed.1001549. Epub 2013 Nov 12.
7
A host-based RT-PCR gene expression signature to identify acute respiratory viral infection.基于宿主的 RT-PCR 基因表达谱识别急性呼吸道病毒感染。
Sci Transl Med. 2013 Sep 18;5(203):203ra126. doi: 10.1126/scitranslmed.3006280.
8
Transcriptional blood signatures distinguish pulmonary tuberculosis, pulmonary sarcoidosis, pneumonias and lung cancers.转录组血液标志物可区分肺结核、肺结节病、肺炎和肺癌。
PLoS One. 2013 Aug 5;8(8):e70630. doi: 10.1371/journal.pone.0070630. Print 2013.
9
A host transcriptional signature for presymptomatic detection of infection in humans exposed to influenza H1N1 or H3N2.宿主转录特征可用于检测人类在接触 H1N1 或 H3N2 流感后的感染前期。
PLoS One. 2013;8(1):e52198. doi: 10.1371/journal.pone.0052198. Epub 2013 Jan 9.
10
Identification of sepsis subtypes in critically ill adults using gene expression profiling.利用基因表达谱鉴定危重症成年患者的脓毒症亚型。
Crit Care. 2012 Oct 4;16(5):R183. doi: 10.1186/cc11667.