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用于监测肿瘤内演变的定量临床成像方法

Quantitative Clinical Imaging Methods for Monitoring Intratumoral Evolution.

作者信息

Kim Joo Yeun, Gatenby Robert A

机构信息

Department of Diagnostic Radiology, H. Lee Moffitt Cancer Center, Tampa, FL, 33612, USA.

Department of Integrative Mathematical Oncology, H. Lee Moffitt Cancer Center, Tampa, FL, 33612, USA.

出版信息

Methods Mol Biol. 2017;1513:61-81. doi: 10.1007/978-1-4939-6539-7_6.

Abstract

Solid tumors are multiscale, open, complex, dynamic systems: complex because they have many interacting components, dynamic because both the components and their interactions can change with time, and open because the tumor freely communicates with surrounding and even distant host tissue. Thus, it is not surprising that striking intratumoral variations are commonly observed in clinical imaging such as MRI and CT and that several recent studies found striking regional variations in the molecular properties of cancer cells from the same tumor. Interestingly, this spatial heterogeneity in molecular properties of tumor cells is typically ascribed to branching clonal evolution due to accumulating mutations while macroscopic variations observed in, for example, clinical MRI scans are usually viewed as functions of blood flow. The clinical significance of spatial heterogeneity has not been fully determined but there is a general consensus that the varying intratumoral landscape along with patient factors such as age, morbidity and lifestyle, contributes significantly to the often unpredictable response of individual patients within a disease cohort treated with the same standard-of-care therapy.Here we investigate the potential link between macroscopic tumor heterogeneity observed by clinical imaging and spatial variations in the observed molecular properties of cancer cells. We build on techniques developed in landscape ecology to link regional variations in the distribution of species with local environmental conditions that define their habitat. That is, we view each region of the tumor as a local ecosystem consisting of environmental conditions such as access to nutrients, oxygen, and means of waste clearance related to blood flow and the local population of tumor cells that both adapt to these conditions and, to some extent, change them through, for example, production of angiogenic factors. Furthermore, interactions among neighboring habitats can produce broader regional dynamics so that the internal diversity of tumors is the net result of complex multiscale somatic Darwinian interactions.Methods in landscape ecology harness Darwinian dynamics to link the environmental properties of a given region to the local populations which are assumed to represent maximally fit phenotypes within those conditions. Consider a common task of a landscape ecologist: defining the spatial distribution of species in a large region, e.g., in a satellite image. Clearly the most accurate approach requires a meter by meter survey of the multiple square kilometers in the region of interest. However, this is both impractical and potentially destructive. Instead, landscape ecology breaks the task into component parts relying on the Darwinian interdependence of environmental properties and fitness of specific species' phenotypic and genotypic properties. First, the satellite map is carefully analyzed to define the number and distribution of habitats. Then the species distribution in a representative sampling of each habitat is empirically determined. Ultimately, this permits sufficient bridging of spatial scales to accurately predict spatial distribution of plant and animal species within large regions.Currently, identifying intratumoral subpopulations requires detailed histological and molecular studies that are expensive and time consuming. Furthermore, this method is subject to sampling bias, is invasive for vital organs such as the brain, and inherently destructive precluding repeated assessments for monitoring post-treatment response and proteogenomic evolution. In contrast, modern cross-sectional imaging can interrogate the entire tumor noninvasively, allowing repeated analysis without disrupting the region of interest. In particular, magnetic resonance imaging (MRI) provides exceptional spatial resolution and generates signals that are unique to the molecular constituents of tissue. Here we propose that MRI scans may be the equivalent of satellite images in landscape ecology and, with appropriate application of Darwinian first principles and sophisticated image analytic methods, can be used to estimate regional variations in the molecular properties of cancer cells.We have initially examined this technique in glioblastoma, a malignant brain neoplasm which is morphologically complex and notorious for a fast progression from diagnosis to recurrence and death, making a suitable subject of noninvasive, rapidly repeated assessment of intratumoral evolution. Quantitative imaging analysis of routine clinical MRIs from glioblastoma has identified macroscopic morphologic characteristics which correlate with proteogenomics and prognosis. The key to the accurate detection and forecasting of intratumoral evolution using quantitative imaging analysis is likely to be in the understanding of the synergistic interactions between observable intratumoral subregions and the resulting tumor behavior.

摘要

实体瘤是多尺度、开放、复杂的动态系统:复杂是因为它们有许多相互作用的成分;动态是因为这些成分及其相互作用会随时间变化;开放是因为肿瘤能与周围甚至远处的宿主组织自由交流。因此,在诸如MRI和CT等临床成像中普遍观察到显著的肿瘤内差异,以及最近的几项研究发现同一肿瘤的癌细胞分子特性存在显著的区域差异,也就不足为奇了。有趣的是,肿瘤细胞分子特性的这种空间异质性通常归因于由于累积突变导致的分支克隆进化,而例如在临床MRI扫描中观察到的宏观差异通常被视为血流的函数。空间异质性的临床意义尚未完全确定,但人们普遍认为,肿瘤内景观的变化以及年龄、发病率和生活方式等患者因素,对同一标准治疗方案治疗的疾病队列中个体患者通常不可预测的反应有显著影响。在这里,我们研究临床成像观察到的宏观肿瘤异质性与癌细胞分子特性的空间变化之间的潜在联系。我们基于景观生态学中开发的技术,将物种分布的区域差异与定义其栖息地的局部环境条件联系起来。也就是说,我们将肿瘤的每个区域视为一个局部生态系统,该生态系统由环境条件组成,如获取营养物质、氧气以及与血流相关的废物清除方式,以及局部肿瘤细胞群体,这些细胞既适应这些条件,又在一定程度上通过例如产生血管生成因子来改变它们。此外,相邻栖息地之间的相互作用可以产生更广泛的区域动态,因此肿瘤的内部多样性是复杂多尺度体细胞达尔文相互作用的净结果。景观生态学方法利用达尔文动态将给定区域的环境特性与局部种群联系起来,这些局部种群被假定代表这些条件下最适应的表型。考虑景观生态学家的一项常见任务:定义一个大区域(例如卫星图像中的区域)内物种的空间分布。显然,最准确的方法需要对感兴趣区域内的数平方公里进行逐米测量。然而,这既不切实际又可能具有破坏性。相反,景观生态学依靠环境特性与特定物种表型和基因型特性适应性之间的达尔文相互依存关系,将任务分解为各个组成部分。首先,仔细分析卫星地图以定义栖息地的数量和分布。然后通过经验确定每个栖息地代表性样本中的物种分布。最终,这允许在空间尺度上进行充分的衔接,以准确预测大区域内动植物物种的空间分布。目前,识别肿瘤内亚群需要详细的组织学和分子研究,这些研究既昂贵又耗时。此外,这种方法容易受到采样偏差的影响,对大脑等重要器官具有侵入性,并且具有内在的破坏性,排除了对治疗后反应和蛋白质基因组进化进行监测的重复评估。相比之下,现代横断面成像可以无创地检查整个肿瘤,允许进行重复分析而不干扰感兴趣区域。特别是,磁共振成像(MRI)提供了出色的空间分辨率,并生成组织分子成分特有的信号。在这里,我们提出MRI扫描可能相当于景观生态学中的卫星图像,并且通过适当应用达尔文第一原理和复杂的图像分析方法,可以用于估计癌细胞分子特性的区域差异。我们最初在胶质母细胞瘤中研究了这种技术,胶质母细胞瘤是一种恶性脑肿瘤,形态复杂,从诊断到复发和死亡进展迅速,是无创、快速重复评估肿瘤内进化的合适对象。对胶质母细胞瘤常规临床MRI的定量成像分析已经确定了与蛋白质基因组学和预后相关的宏观形态特征。使用定量成像分析准确检测和预测肿瘤内进化的关键可能在于理解可观察到的肿瘤内亚区域之间的协同相互作用以及由此产生的肿瘤行为。

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