Wang Wen-Tao, Ye Hua, Wei Pan-Pan, Han Bo-Wei, He Bo, Chen Zhen- Hua, Chen Yue-Qin
Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory for Biocontrol, Sun Yat-sen University, Guangzhou, 510275, People's Republic of China.
Department of Hepatobiliary, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, 510120, People's Republic of China.
J Hematol Oncol. 2016 Nov 3;9(1):117. doi: 10.1186/s13045-016-0348-0.
Long non-coding RNAs (lncRNAs) are known to play important roles in different cell contexts, including cancers. However, little is known about lncRNAs in cholangiocarcinoma (CCA), a cholangiocyte malignancy with poor prognosis, associated with chronic inflammation and damage to the biliary epithelium. The aim of the study is to identify if any lncRNA might associate with inflammation or oxidative stress in CCA and regulate the disease progression.
In this study, RNA-seqs datasets were used to identify aberrantly expressed lncRNAs. Small interfering RNA and overexpressed plasmids were used to modulate the expression of lncRNAs, and luciferase target assay RNA immunoprecipitation (RIP) was performed to explore the mechanism of miRNA-lncRNA sponging.
We firstly analyzed five available RNA-seqs datasets to investigate aberrantly expressed lncRNAs which might associate with inflammation or oxidative stress. We identified that two lncRNAs, H19 and HULC, were differentially expressed among all the samples under the treatment of hypoxic or inflammatory factors, and they were shown to be stimulated by short-term oxidative stress responses to HO and glucose oxidase in CCA cell lines. Further studies revealed that these two lncRNAs promoted cholangiocyte migration and invasion via the inflammation pathway. H19 and HULC functioned as competing endogenous RNAs (ceRNAs) by sponging let-7a/let-7b and miR-372/miR-373, respectively, which activate pivotal inflammation cytokine IL-6 and chemokine receptor CXCR4.
Our study revealed that H19 and HULC, up-regulated by oxidative stress, regulate CCA cell migration and invasion by targeting IL-6 and CXCR4 via ceRNA patterns of sponging let-7a/let-7b and miR-372/miR-373, respectively. The results suggest that these lncRNAs might be the chief culprits of CCA pathogenesis and progression. The study provides new insight into the mechanism linking lncRNA function with CCA and may serve as novel targets for the development of new countermeasures of CCA.
长链非编码RNA(lncRNAs)在包括癌症在内的不同细胞环境中发挥重要作用。然而,对于胆管癌(CCA)中的lncRNAs却知之甚少,CCA是一种预后较差的胆管细胞恶性肿瘤,与慢性炎症和胆管上皮损伤有关。本研究的目的是确定是否有lncRNA可能与CCA中的炎症或氧化应激相关,并调节疾病进展。
在本研究中,RNA测序数据集用于鉴定异常表达的lncRNAs。使用小干扰RNA和过表达质粒调节lncRNAs的表达,并进行荧光素酶靶标分析和RNA免疫沉淀(RIP)以探索miRNA-lncRNA海绵化的机制。
我们首先分析了五个可用的RNA测序数据集,以研究可能与炎症或氧化应激相关的异常表达的lncRNAs。我们发现,在缺氧或炎症因子处理下的所有样本中,两个lncRNAs,即H19和HULC,存在差异表达,并且它们在CCA细胞系中被短期氧化应激反应(如过氧化氢和葡萄糖氧化酶)所刺激。进一步研究表明,这两个lncRNAs通过炎症途径促进胆管细胞迁移和侵袭。H19和HULC分别通过海绵化let-7a/let-7b和miR-372/miR-373作为竞争性内源RNA(ceRNAs)发挥作用,从而激活关键炎症细胞因子IL-6和趋化因子受体CXCR4。
我们的研究表明,由氧化应激上调的H19和HULC分别通过海绵化let-7a/let-7b和miR-372/miR-373的ceRNA模式靶向IL-6和CXCR4,从而调节CCA细胞迁移和侵袭。结果表明,这些lncRNAs可能是CCA发病机制和进展的主要元凶。该研究为lncRNA功能与CCA之间的联系机制提供了新的见解,并可能作为开发CCA新对策的新靶点。