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突变率的群体异质性增加高阶突变体的频率并降低长期突变负荷。

Population Heterogeneity in Mutation Rate Increases the Frequency of Higher-Order Mutants and Reduces Long-Term Mutational Load.

作者信息

Alexander Helen K, Mayer Stephanie I, Bonhoeffer Sebastian

机构信息

Institute of Integrative Biology, Department of Environmental Systems Science, ETH Zürich, Switzerland.

出版信息

Mol Biol Evol. 2017 Feb 1;34(2):419-436. doi: 10.1093/molbev/msw244.

Abstract

Mutation rate is a crucial evolutionary parameter that has typically been treated as a constant in population genetic analyses. However, the propensity to mutate is likely to vary among co-existing individuals within a population, due to genetic polymorphisms, heterogeneous environmental influences, and random physiological fluctuations. We review the evidence for mutation rate heterogeneity and explore its consequences by extending classic population genetic models to allow an arbitrary distribution of mutation rate among individuals, either with or without inheritance. With this general new framework, we rigorously establish the effects of heterogeneity at various evolutionary timescales. In a single generation, variation of mutation rate about the mean increases the probability of producing zero or many simultaneous mutations on a genome. Over multiple generations of mutation and selection, heterogeneity accelerates the appearance of both deleterious and beneficial multi-point mutants. At mutation-selection balance, higher-order mutant frequencies are likewise boosted, while lower-order mutants exhibit subtler effects; nonetheless, population mean fitness is always enhanced. We quantify the dependencies on moments of the mutation rate distribution and selection coefficients, and clarify the role of mutation rate inheritance. While typical methods of estimating mutation rate will recover only the population mean, analyses assuming mutation rate is fixed to this mean could underestimate the potential for multi-locus adaptation, including medically relevant evolution in pathogenic and cancerous populations. We discuss the potential to empirically parameterize mutation rate distributions, which have to date hardly been quantified.

摘要

突变率是一个关键的进化参数,在群体遗传学分析中通常被视为一个常数。然而,由于基因多态性、异质环境影响和随机生理波动,群体中同时存在的个体之间发生突变的倾向可能会有所不同。我们回顾了突变率异质性的证据,并通过扩展经典群体遗传模型来探讨其后果,该模型允许个体间突变率的任意分布,无论有无遗传。利用这个全新的通用框架,我们严格确定了异质性在不同进化时间尺度上的影响。在单一代中,突变率围绕均值的变化增加了基因组上产生零个或多个同时突变的概率。在经过多代的突变和选择后,异质性加速了有害和有益的多点突变体的出现。在突变 - 选择平衡时,高阶突变体频率同样会增加,而低阶突变体表现出更微妙的影响;尽管如此,群体平均适应性总是会提高。我们量化了对突变率分布矩和选择系数的依赖性,并阐明了突变率遗传的作用。虽然估计突变率的典型方法只能得出群体均值,但假设突变率固定在该均值的分析可能会低估多位点适应的潜力,包括致病群体和癌性群体中与医学相关的进化。我们讨论了对突变率分布进行实证参数化的可能性,而到目前为止,突变率分布几乎尚未被量化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/74fe/5850754/6124507e9411/msw244f1.jpg

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