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过氧化物还原中的过渡步骤和原核过氧化物酶的过氧化物稳健性的分子开关。

Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins.

机构信息

Bioinformatics Institute, Agency for Science, Technology and Research (A*STAR), 30 Biopolis Street, #07-01 Matrix, Singapore 138671, Republic of Singapore.

School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Republic of Singapore.

出版信息

Sci Rep. 2016 Nov 28;6:37610. doi: 10.1038/srep37610.

Abstract

In addition to their antioxidant function, the eukaryotic peroxiredoxins (Prxs) facilitate peroxide-mediated signaling by undergoing controlled inactivation by peroxide-driven over-oxidation. In general, the bacterial enzyme lacks this controlled inactivation mechanism, making it more resistant to high HO concentrations. During peroxide reduction, the active site alternates between reduced, fully folded (FF), and oxidized, locally unfolded (LU) conformations. Here we present novel insights into the divergence of bacterial and human Prxs in robustness and sensitivity to inactivation, respectively. Structural details provide new insights into sub-steps during the catalysis of peroxide reduction, enabling the transition from an FF to a LU conformation. Complementary to mutational and enzymatic results, these data unravel the essential role of the C-terminal tail of bacterial Prxs to act as a molecular switch, mediating the transition from an FF to a LU state. In addition, we propose that the C-terminal tail has influence on the propensity of the disulphide bond formation, indicating that as a consequence on the robustness and sensitivity to over-oxidation. Finally, a physical linkage between the catalytic site, the C-terminal tail and the oligomer interface is described.

摘要

除了其抗氧化功能外,真核过氧化物酶(Prx)还通过过氧化物驱动的过氧化作用控制失活,促进过氧化物介导的信号转导。一般来说,细菌酶缺乏这种控制失活机制,使其对高 HO 浓度更具抵抗力。在过氧化物还原过程中,活性位点在还原、完全折叠(FF)和氧化、局部展开(LU)构象之间交替。在这里,我们提出了细菌和人类 Prx 在稳健性和失活敏感性方面的分歧的新见解。结构细节提供了关于过氧化物还原催化过程中亚步骤的新见解,从而实现了从 FF 到 LU 构象的转变。除了突变和酶学结果外,这些数据还揭示了细菌 Prx 的 C 末端尾巴作为分子开关的重要作用,介导了从 FF 到 LU 状态的转变。此外,我们提出 C 末端尾巴对二硫键形成的倾向有影响,表明对过氧化作用的稳健性和敏感性有影响。最后,描述了催化位点、C 末端尾巴和寡聚体界面之间的物理联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e918/5124861/58139b42e82d/srep37610-f1.jpg

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