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1
Outer membrane protein design.外膜蛋白设计。
Curr Opin Struct Biol. 2017 Aug;45:45-52. doi: 10.1016/j.sbi.2016.11.003. Epub 2016 Nov 26.
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[Research progress on the folding and membrane-insertion mechanisms of beta-barrel outer membrane protein of gram-negative bacteria--a review].[革兰氏阴性菌β-桶状外膜蛋白折叠与膜插入机制的研究进展——综述]
Wei Sheng Wu Xue Bao. 2014 Mar 4;54(3):261-8.
3
BamA β16C strand and periplasmic turns are critical for outer membrane protein insertion and assembly.BamA β16C链和周质转角对外膜蛋白的插入和组装至关重要。
Biochem J. 2017 Nov 21;474(23):3951-3961. doi: 10.1042/BCJ20170636.
4
Structural snapshots of the β-barrel assembly machinery.β桶组装机器的结构快照。
FEBS J. 2017 Jun;284(12):1778-1786. doi: 10.1111/febs.13960. Epub 2016 Nov 29.
5
From Constructs to Crystals - Towards Structure Determination of β-barrel Outer Membrane Proteins.从构建体到晶体——迈向β-桶状外膜蛋白的结构测定
J Vis Exp. 2016 Jul 4(113):53245. doi: 10.3791/53245.
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Prediction and design of outer membrane protein-protein interactions.外膜蛋白-蛋白相互作用的预测与设计
Methods Mol Biol. 2013;1063:183-96. doi: 10.1007/978-1-62703-583-5_10.
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Assembly of β-barrel proteins into bacterial outer membranes.β-桶状蛋白组装到细菌外膜中。
Biochim Biophys Acta. 2014 Aug;1843(8):1542-50. doi: 10.1016/j.bbamcr.2013.10.009. Epub 2013 Oct 14.
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Biogenesis of beta-barrel proteins in evolutionary context.进化背景下β-桶状蛋白的生物合成
Int J Med Microbiol. 2015 Feb;305(2):259-64. doi: 10.1016/j.ijmm.2014.12.009. Epub 2014 Dec 24.
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Evolutionary pathways of repeat protein topology in bacterial outer membrane proteins.细菌外膜蛋白中重复蛋白拓扑结构的进化途径。
Elife. 2018 Nov 29;7:e40308. doi: 10.7554/eLife.40308.
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The β-Barrel Assembly Machinery Complex.β桶组装机器复合体
Methods Mol Biol. 2015;1329:1-16. doi: 10.1007/978-1-4939-2871-2_1.
引用本文的文献
1
Immunoinformatics design of a novel multiepitope vaccine candidate against non-typhoidal salmonellosis caused by Salmonella Kentucky using outer membrane proteins A, C, and F.利用外膜蛋白A、C和F针对肯塔基沙门氏菌引起的非伤寒沙门氏菌病设计一种新型多表位疫苗候选物的免疫信息学研究
PLoS One. 2025 Jan 10;20(1):e0306200. doi: 10.1371/journal.pone.0306200. eCollection 2025.
2
Gating of β-Barrel Protein Pores, Porins, and Channels: An Old Problem with New Facets.β-桶状蛋白孔道、孔蛋白和通道的门控：一个具有新方面的老问题。
Int J Mol Sci. 2023 Jul 28;24(15):12095. doi: 10.3390/ijms241512095.
3
Modeling intermediates of BamA folding an outer membrane protein.BamA 折叠外膜蛋白中间态的建模。
Biophys J. 2022 Sep 6;121(17):3242-3252. doi: 10.1016/j.bpj.2022.07.027. Epub 2022 Aug 4.
4
Membrane Protein Engineering with Rosetta.利用 Rosetta 进行膜蛋白工程。
Methods Mol Biol. 2021;2315:43-57. doi: 10.1007/978-1-0716-1468-6_3.
5
Inward-facing glycine residues create sharp turns in β-barrel membrane proteins.向内指向的甘氨酸残基在β桶膜蛋白中形成急转弯。
Biochim Biophys Acta Biomembr. 2021 Oct 1;1863(10):183662. doi: 10.1016/j.bbamem.2021.183662. Epub 2021 Jun 17.
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Computational structure prediction provides a plausible mechanism for electron transfer by the outer membrane protein Cyc2 from Acidithiobacillus ferrooxidans.计算结构预测为铁氧化硫杆菌外膜蛋白 Cyc2 的电子转移提供了一个合理的机制。
Protein Sci. 2021 Aug;30(8):1640-1652. doi: 10.1002/pro.4106. Epub 2021 May 25.
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Structure Determination of Membrane Proteins Using X-Ray Crystallography.使用 X 射线晶体学确定膜蛋白结构。
Methods Mol Biol. 2021;2302:101-136. doi: 10.1007/978-1-0716-1394-8_7.
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Protein Ligand-Induced Amplification in the 1/ Noise of a Protein-Selective Nanopore.蛋白质配体诱导的蛋白质选择性纳米孔中 1/噪声放大。
Langmuir. 2020 Dec 22;36(50):15247-15257. doi: 10.1021/acs.langmuir.0c02498. Epub 2020 Dec 13.
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Water in Nanopores and Biological Channels: A Molecular Simulation Perspective.纳米孔和生物通道中的水：分子模拟视角。
Chem Rev. 2020 Sep 23;120(18):10298-10335. doi: 10.1021/acs.chemrev.9b00830. Epub 2020 Aug 25.
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Structural and Molecular Docking Analytical Studies of the Predicted Ligand Binding Sites of Cadherin-1 in Cancer Prognostics.钙黏蛋白-1预测配体结合位点在癌症预后中的结构和分子对接分析研究
Adv Appl Bioinform Chem. 2020 Jul 28;13:1-9. doi: 10.2147/AABC.S253851. eCollection 2020.
本文引用的文献
1
Outer Membrane Protein Folding and Topology from a Computational Transfer Free Energy Scale.基于计算转移自由能标度的外膜蛋白折叠与拓扑结构
J Am Chem Soc. 2016 Mar 2;138(8):2592-601. doi: 10.1021/jacs.5b10307. Epub 2016 Feb 19.
2
Global redesign of a native β-barrel scaffold.天然β-桶状支架的全局重新设计。
Biochim Biophys Acta. 2016 Jan;1858(1):19-29. doi: 10.1016/j.bbamem.2015.10.006. Epub 2015 Oct 9.
3
An Integrated Framework Advancing Membrane Protein Modeling and Design.推进膜蛋白建模与设计的综合框架
PLoS Comput Biol. 2015 Sep 1;11(9):e1004398. doi: 10.1371/journal.pcbi.1004398. eCollection 2015 Sep.
4
Computational redesign of the lipid-facing surface of the outer membrane protein OmpA.外膜蛋白OmpA脂质接触面的计算重新设计。
Proc Natl Acad Sci U S A. 2015 Aug 4;112(31):9632-7. doi: 10.1073/pnas.1501836112. Epub 2015 Jul 21.
5
Methods for the directed evolution of proteins.蛋白质定向进化的方法。
Nat Rev Genet. 2015 Jul;16(7):379-94. doi: 10.1038/nrg3927. Epub 2015 Jun 9.
6
IR-spectroscopic characterization of an elongated OmpG mutant.一种延长型OmpG突变体的红外光谱表征
Arch Biochem Biophys. 2015 Jun 15;576:73-9. doi: 10.1016/j.abb.2015.04.010. Epub 2015 May 6.
7
Directed evolution of a far-red fluorescent rhodopsin.远红光荧光视紫红质的定向进化
Proc Natl Acad Sci U S A. 2014 Sep 9;111(36):13034-9. doi: 10.1073/pnas.1413987111. Epub 2014 Aug 25.
8
Structure-based engineering of a minimal porin reveals loop-independent channel closure.基于结构的最小孔道蛋白工程揭示了无需环依赖的通道关闭。
Biochemistry. 2014 Jul 29;53(29):4826-38. doi: 10.1021/bi500660q. Epub 2014 Jul 15.
9
Functional truncated membrane pores.功能性截断的膜孔。
Proc Natl Acad Sci U S A. 2014 Feb 18;111(7):2425-30. doi: 10.1073/pnas.1312976111. Epub 2014 Jan 27.
10
Membrane proteins by accident or design.偶然或设计的膜蛋白。
Curr Opin Chem Biol. 2013 Dec;17(6):976-81. doi: 10.1016/j.cbpa.2013.10.005.
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