Katz Evgeny, Poghossian Arshak, Schöning Michael J
Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, 13699-5810, USA.
Institute of Nano- and Biotechnologies, FH Aachen, Aachen University of Applied Sciences, Campus Jülich, Heinrich-Mußmann-Str. 1, 52428, Jülich, Germany.
Anal Bioanal Chem. 2017 Jan;409(1):81-94. doi: 10.1007/s00216-016-0079-7. Epub 2016 Nov 29.
The paper is an overview of enzyme-based logic gates and their short circuits, with specific examples of Boolean AND and OR gates, and concatenated logic gates composed of multi-step enzyme-biocatalyzed reactions. Noise formation in the biocatalytic reactions and its decrease by adding a "filter" system, converting convex to sigmoid response function, are discussed. Despite the fact that the enzyme-based logic gates are primarily considered as components of future biomolecular computing systems, their biosensing applications are promising for immediate practical use. Analytical use of the enzyme logic systems in biomedical and forensic applications is discussed and exemplified with the logic analysis of biomarkers of various injuries, e.g., liver injury, and with analysis of biomarkers characteristic of different ethnicity found in blood samples on a crime scene. Interfacing of enzyme logic systems with modified electrodes and semiconductor devices is discussed, giving particular attention to the interfaces functionalized with signal-responsive materials. Future perspectives in the design of the biomolecular logic systems and their applications are discussed in the conclusion. Graphical Abstract Various applications and signal-transduction methods are reviewed for enzyme-based logic systems.
本文是对基于酶的逻辑门及其短路的概述,包含布尔与门和或门的具体示例,以及由多步酶生物催化反应组成的串联逻辑门。讨论了生物催化反应中的噪声形成以及通过添加“过滤”系统将凸响应函数转换为S形响应函数来降低噪声的方法。尽管基于酶的逻辑门主要被视为未来生物分子计算系统的组件,但其生物传感应用有望立即投入实际使用。文中讨论了酶逻辑系统在生物医学和法医应用中的分析用途,并举例说明了对各种损伤(如肝损伤)的生物标志物进行逻辑分析,以及对犯罪现场血样中发现的不同种族特征的生物标志物进行分析。还讨论了酶逻辑系统与修饰电极和半导体器件的接口,特别关注用信号响应材料功能化的接口。结论部分讨论了生物分子逻辑系统设计及其应用的未来前景。图形摘要回顾了基于酶的逻辑系统的各种应用和信号转导方法。