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古菌信号识别颗粒:当前的认识与未来展望

The Archaeal Signal Recognition Particle: Present Understanding and Future Perspective.

作者信息

Gupta Sayandeep, Roy Mousam, Ghosh Abhrajyoti

机构信息

Department of Biochemistry, Bose Institute, Centenary Campus, P 1/12, C. I. T. Road, Scheme - VIIM, Kolkata, 700054, West Bengal, India.

出版信息

Curr Microbiol. 2017 Feb;74(2):284-297. doi: 10.1007/s00284-016-1167-9. Epub 2016 Nov 29.

DOI:10.1007/s00284-016-1167-9
PMID:27900448
Abstract

The signal recognition particle (SRP) and its receptor constitute universally conserved and essential cellular machinery that controls the proper membrane localization of nascent polypeptides with the transmembrane domain. In the past decade, there has been an immense advancement in our understanding of this targeting machine in all three domains of life. A significant portion of such progress came from the structural analysis of archaeal SRP components. Despite the availability of structural insights from different archaeal SRP components, little is known about protein translocation in this domain of life compared to either bacteria or eukaryotes. One of the primary reasons being limited availability of the genetic and cell biological tools in archaea. In the present review, an attempt has been made to explore the structural information available for archaeal SRP components to gain insights into the protein translocation mechanism of this group of organisms. Besides, many exciting avenues of archaeal research possible using the recently developed genetic and cell biological tools for some species have been identified.

摘要

信号识别颗粒(SRP)及其受体构成了普遍保守且必不可少的细胞机制,该机制控制着带有跨膜结构域的新生多肽的正确膜定位。在过去十年中,我们对生命所有三个域中的这种靶向机制的理解有了巨大进展。此类进展的很大一部分来自古菌SRP组分的结构分析。尽管有来自不同古菌SRP组分的结构见解,但与细菌或真核生物相比,我们对生命这个域中的蛋白质转运了解甚少。主要原因之一是古菌中遗传和细胞生物学工具的可用性有限。在本综述中,我们试图探索古菌SRP组分可用的结构信息,以深入了解这组生物体的蛋白质转运机制。此外,还确定了许多利用最近为某些物种开发的遗传和细胞生物学工具进行古菌研究的令人兴奋的途径。

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本文引用的文献

1
Electrostatics and Intrinsic Disorder Drive Translocon Binding of the SRP Receptor FtsY.静电作用和固有无序驱动 SRP 受体 FtsY 与易位子的结合。
Angew Chem Int Ed Engl. 2016 Aug 8;55(33):9544-7. doi: 10.1002/anie.201602905. Epub 2016 Jun 27.
2
Structural Basis for Conserved Regulation and Adaptation of the Signal Recognition Particle Targeting Complex.信号识别颗粒靶向复合物保守调控与适应性的结构基础
J Mol Biol. 2016 Jul 17;428(14):2880-97. doi: 10.1016/j.jmb.2016.05.015. Epub 2016 May 27.
3
Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
带有信号识别颗粒(SRP)及其受体以及转运体的大肠杆菌翻译核糖体的结构。
Nat Commun. 2016 Jan 25;7:10471. doi: 10.1038/ncomms10471.
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Circularization restores signal recognition particle RNA functionality in Thermoproteus.环化可恢复嗜热栖热菌中信号识别颗粒RNA的功能。
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Ribosome binding induces repositioning of the signal recognition particle receptor on the translocon.核糖体结合诱导信号识别颗粒受体在易位子上重新定位。
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Translational arrest by a prokaryotic signal recognition particle is mediated by RNA interactions.原核信号识别颗粒介导的翻译暂停是由 RNA 相互作用介导的。
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Signal-sequence induced conformational changes in the signal recognition particle.信号序列诱导信号识别颗粒中的构象变化。
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Ribosome-SRP-FtsY cotranslational targeting complex in the closed state.处于关闭状态的核糖体 - SRP - FtsY共翻译靶向复合体。
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Polyploidy in archaea and bacteria: about desiccation resistance, giant cell size, long-term survival, enforcement by a eukaryotic host and additional aspects.古菌和细菌中的多倍体:关于抗干燥性、巨大细胞大小、长期存活、由真核宿主施加的影响及其他方面
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Co-translational membrane association of the Escherichia coli SRP receptor.大肠杆菌信号识别颗粒(SRP)受体的共翻译膜结合
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