Arahal David R, Lucena Teresa, Macián M Carmen, Ruvira María A, González José M, Lekumberri Itziar, Pinhassi Jarone, Pujalte María J
Departamento de Microbiología y Ecología, Universitat de València, 46100 Burjassot (València), Spain.
Colección Española de Cultivos Tipo (CECT), Universitat de València, 46980 Paterna (València), Spain.
Int J Syst Evol Microbiol. 2016 Dec;66(12):5544-5549. doi: 10.1099/ijsem.0.001554. Epub 2016 Oct 9.
A novel Gram-staining-negative, chemoorganotrophic, moderately halophilic, strictly aerobic bacterium, strain MED121T, was isolated from a seawater sample collected at the Blanes Bay Microbial Observatory in the north-western Mediterranean Sea. Analysis of its 16S rRNA gene sequence, retrieved from the whole-genome sequence, showed that this bacterium was most closely related to Marinomonas dokdonensis and other Marinomonas species (96.3 and 93.3-95.7 % sequence similarities, respectively), within the family Oceanospirillaceae. Strain MED121T was included into a whole-genome sequencing study and, subsequently, it was characterized using a polyphasic taxonomic approach. It was found to be oxidase and catalase positive, its cells are cocci to short rods, it does not ferment carbohydrates and does not reduce nitrate to nitrite or gas and it requires at least 2.5 % (w/v) marine salts and tolerates up to 7 % (w/v) salts. Its major cellular fatty acids in order of abundance are C16 : 1ω7c/C16 : 1ω6c, C18 : 1ω7c, C16 : 0 and C10 : 0 3-OH. Its genome had an approximate length of 5.1 million bases and a DNA G+C content equal to 40.9 mol%. Analysis of the annotated genes reveals the capacity for the synthesis of ubiquinone 8 (Q8) and the polar lipids phosphatidylglycerol and phosphatidylethanolamine, in agreement with other members of the genus. All the data collected supported the creation of a novel species to accommodate this bacterium, for which the name Marinomonas blandensis sp. nov. is proposed. The type strain is MED121T (=CECT 7076T=LMG 29722T).
从地中海西北部布兰内斯湾微生物观测站采集的海水样本中分离出一株新型革兰氏染色阴性、化能有机营养、中度嗜盐、严格需氧的细菌,菌株MED121T。从全基因组序列中检索到的其16S rRNA基因序列分析表明,该细菌与多哥海单胞菌及其他海单胞菌属物种关系最为密切(序列相似性分别为96.3%和93.3 - 95.7%),属于海螺旋菌科。菌株MED121T被纳入全基因组测序研究,随后采用多相分类方法对其进行了表征。发现它氧化酶和过氧化氢酶呈阳性,细胞为球菌至短杆菌,不发酵碳水化合物,不将硝酸盐还原为亚硝酸盐或气体,并且至少需要2.5%(w/v)的海盐,耐受高达7%(w/v)的盐。其主要细胞脂肪酸按丰度顺序为C16 : 1ω7c/C16 : 1ω6c、C18 : 1ω7c、C16 : 0和C10 : 0 3-OH。其基因组长度约为510万个碱基,DNA G+C含量为40.9 mol%。对注释基因的分析揭示了其合成泛醌8(Q8)以及极性脂质磷脂酰甘油和磷脂酰乙醇胺的能力,这与该属的其他成员一致。收集到的所有数据支持创建一个新物种来容纳这种细菌,为此提出了新名称多哥海单胞菌(Marinomonas blandensis sp. nov.)。模式菌株为MED121T(=CECT 7076T=LMG 29722T)。