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piezotolerans Marinomonas 种,从太平洋雅浦海沟深海沉积物中分离得到。

Marinomonas piezotolerans sp. nov., isolated from deep-sea sediment of the Yap Trench, Pacific Ocean.

机构信息

1​School of Life Science and Technology, Harbin Institute of Technology, Harbin 150080, PR China.

2​Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, State Oceanic Administration, Xiamen 361005, PR China.

出版信息

Int J Syst Evol Microbiol. 2019 Mar;69(3):739-744. doi: 10.1099/ijsem.0.003227. Epub 2019 Jan 16.

Abstract

A Gram-stain-negative, aerobic and rod-shaped strain, YLB-05, was isolated from a sample of deep-sea sediment (depth, 6796 m) from the Yap Trench. It was motile, oxidase-positive and catalase-positive. Growth was observed at salinities of 1-12 % (NaCl, w/v), with the optimum at 5 %. The strain was able to thrive at low (4 °C) temperatures, with the optimum at 37 °C, but did not grow at 50 °C. The optimum pressure for growth was 0.1 MPa with tolerance up to 50 MPa. The 16S rRNA gene sequencing analysis showed that YLB-05 was most closely related to Marinomonas communis LMG 2864 (97.8 %). Phylogenetic analysis placed strain YLB-05 within the genus Marinomonas. The average nucleotide identity and the DNA-DNA hybridization values between strain YLB-05 and closely related type strains were below the respective thresholds for species differentiation. The principal fatty acids were C16 : 0, summed feature 8 (C18 : 1 ω7c and/or C18 : 1 ω6c) and summed feature 3 (C16 : 1ω7c/C16 : 1 ω6c). The DNA G+C content was 45.7 mol%. The respiratory quinone was determined to be Q-8. The polar lipids were an unidentified phospholipid and an unidentified aminophospholipid. The combined genotypic and phenotypic data showed that strain YLB-05 represents a novel species within the genus Marinomonas, for which the name Marinomonaspiezotolerans sp. nov. is proposed, with the type strain YLB-05 (=MCCC 1A12712=KCTC 62812).

摘要

一株革兰氏阴性、需氧、杆状的菌株 YLB-05,从雅浦海沟(深度 6796 米)的深海沉积物样本中分离得到。它是运动的,氧化酶阳性,过氧化氢酶阳性。在盐度为 1-12%(NaCl,w/v)的条件下生长,最佳盐度为 5%。该菌株能在低温(4°C)下生长,最适温度为 37°C,但不能在 50°C 下生长。生长的最佳压力为 0.1 MPa,耐受压力高达 50 MPa。16S rRNA 基因测序分析表明,YLB-05 与 Marinomonas communis LMG 2864(97.8%)最为密切相关。系统发育分析将菌株 YLB-05 置于 Marinomonas 属内。菌株 YLB-05 与密切相关的模式株之间的平均核苷酸同一性和 DNA-DNA 杂交值均低于种间分化的相应阈值。主要脂肪酸为 C16:0、特征性脂肪酸 8(C18:1 ω7c 和/或 C18:1 ω6c)和特征性脂肪酸 3(C16:1 ω7c/C16:1 ω6c)。DNA G+C 含量为 45.7 mol%。呼吸醌为 Q-8。极性脂类为未鉴定的磷脂和未鉴定的氨基磷脂。综合表型和基因型数据表明,菌株 YLB-05 代表 Marinomonas 属中的一个新种,提议将其命名为 Marinomonaspiezotolerans sp. nov.,其模式株为 YLB-05(=MCCC 1A12712=KCTC 62812)。

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