1School of Life Science and Technology, Harbin Institute of Technology, Harbin 150080, PR China.
2Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, State Oceanic Administration, Xiamen 361005, PR China.
Int J Syst Evol Microbiol. 2019 Mar;69(3):739-744. doi: 10.1099/ijsem.0.003227. Epub 2019 Jan 16.
A Gram-stain-negative, aerobic and rod-shaped strain, YLB-05, was isolated from a sample of deep-sea sediment (depth, 6796 m) from the Yap Trench. It was motile, oxidase-positive and catalase-positive. Growth was observed at salinities of 1-12 % (NaCl, w/v), with the optimum at 5 %. The strain was able to thrive at low (4 °C) temperatures, with the optimum at 37 °C, but did not grow at 50 °C. The optimum pressure for growth was 0.1 MPa with tolerance up to 50 MPa. The 16S rRNA gene sequencing analysis showed that YLB-05 was most closely related to Marinomonas communis LMG 2864 (97.8 %). Phylogenetic analysis placed strain YLB-05 within the genus Marinomonas. The average nucleotide identity and the DNA-DNA hybridization values between strain YLB-05 and closely related type strains were below the respective thresholds for species differentiation. The principal fatty acids were C16 : 0, summed feature 8 (C18 : 1 ω7c and/or C18 : 1 ω6c) and summed feature 3 (C16 : 1ω7c/C16 : 1 ω6c). The DNA G+C content was 45.7 mol%. The respiratory quinone was determined to be Q-8. The polar lipids were an unidentified phospholipid and an unidentified aminophospholipid. The combined genotypic and phenotypic data showed that strain YLB-05 represents a novel species within the genus Marinomonas, for which the name Marinomonaspiezotolerans sp. nov. is proposed, with the type strain YLB-05 (=MCCC 1A12712=KCTC 62812).
一株革兰氏阴性、需氧、杆状的菌株 YLB-05,从雅浦海沟(深度 6796 米)的深海沉积物样本中分离得到。它是运动的,氧化酶阳性,过氧化氢酶阳性。在盐度为 1-12%(NaCl,w/v)的条件下生长,最佳盐度为 5%。该菌株能在低温(4°C)下生长,最适温度为 37°C,但不能在 50°C 下生长。生长的最佳压力为 0.1 MPa,耐受压力高达 50 MPa。16S rRNA 基因测序分析表明,YLB-05 与 Marinomonas communis LMG 2864(97.8%)最为密切相关。系统发育分析将菌株 YLB-05 置于 Marinomonas 属内。菌株 YLB-05 与密切相关的模式株之间的平均核苷酸同一性和 DNA-DNA 杂交值均低于种间分化的相应阈值。主要脂肪酸为 C16:0、特征性脂肪酸 8(C18:1 ω7c 和/或 C18:1 ω6c)和特征性脂肪酸 3(C16:1 ω7c/C16:1 ω6c)。DNA G+C 含量为 45.7 mol%。呼吸醌为 Q-8。极性脂类为未鉴定的磷脂和未鉴定的氨基磷脂。综合表型和基因型数据表明,菌株 YLB-05 代表 Marinomonas 属中的一个新种,提议将其命名为 Marinomonaspiezotolerans sp. nov.,其模式株为 YLB-05(=MCCC 1A12712=KCTC 62812)。