从日本淡水池塘和河口分离的两种米米病毒菌株的近乎完整的基因组序列
Nearly Complete Genome Sequences of Two Mimivirus Strains Isolated from a Japanese Freshwater Pond and River Mouth.
作者信息
Takemura Masaharu, Mikami Tatsuya, Murono Shingo
机构信息
Laboratory of Biology, Department of Liberal Arts, Faculty of Science, Tokyo University of Science, Shinjuku, Tokyo, Japan
Graduate School of Mathematics and Science Education, Tokyo University of Science, Shinjuku, Tokyo, Japan.
出版信息
Genome Announc. 2016 Dec 8;4(6):e01378-16. doi: 10.1128/genomeA.01378-16.
Abstract
Members of the Mimiviridae family are large DNA viruses that infect Acanthamoeba cells. Here, we report the genome sequences of two new Mimiviridae family members, isolated from water samples from Shirakoma Pond and the mouth of the Arakawa River in Japan, with nearly complete genome sizes of 1,182,849 and 1,182,801 bp, respectively.
摘要
米米病毒科的成员是感染棘阿米巴细胞的大型DNA病毒。在此，我们报告了从日本白驹池和荒川河口的水样中分离出的两个米米病毒科新成员的基因组序列，其基因组大小几乎完整，分别为1,182,849和1,182,801碱基对。
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本文引用的文献
1
Isolation and complete genome sequencing of Mimivirus bombay, a Giant Virus in sewage of Mumbai, India.
Genom Data. 2016 May 31;9:1-3. doi: 10.1016/j.gdata.2016.05.013. eCollection 2016 Sep.
2
Giant Viruses of Amoebas: An Update.
Front Microbiol. 2016 Mar 22;7:349. doi: 10.3389/fmicb.2016.00349. eCollection 2016.
3
The rapidly expanding universe of giant viruses: Mimivirus, Pandoravirus, Pithovirus and Mollivirus.
FEMS Microbiol Rev. 2015 Nov;39(6):779-96. doi: 10.1093/femsre/fuv037. Epub 2015 Sep 20.
4
In-depth study of Mollivirus sibericum, a new 30,000-y-old giant virus infecting Acanthamoeba.
Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):E5327-35. doi: 10.1073/pnas.1510795112. Epub 2015 Sep 8.
5
Samba virus: a novel mimivirus from a giant rain forest, the Brazilian Amazon.
Virol J. 2014 May 14;11:95. doi: 10.1186/1743-422X-11-95.
6
Distant Mimivirus relative with a larger genome highlights the fundamental features of Megaviridae.
Proc Natl Acad Sci U S A. 2011 Oct 18;108(42):17486-91. doi: 10.1073/pnas.1110889108. Epub 2011 Oct 10.
7
Viruses with more than 1,000 genes: Mamavirus, a new Acanthamoeba polyphaga mimivirus strain, and reannotation of Mimivirus genes.
Genome Biol Evol. 2011;3:737-42. doi: 10.1093/gbe/evr048. Epub 2011 Jun 24.
8
The 1.2-megabase genome sequence of Mimivirus.
Science. 2004 Nov 19;306(5700):1344-50. doi: 10.1126/science.1101485. Epub 2004 Oct 14.
9
A giant virus in amoebae.
Science. 2003 Mar 28;299(5615):2033. doi: 10.1126/science.1081867.
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