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韩国散发性肌萎缩侧索硬化症患者中TBK1变异体的遗传与功能分析

Genetic and functional analysis of TBK1 variants in Korean patients with sporadic amyotrophic lateral sclerosis.

作者信息

Kim Young-Eun, Oh Ki-Wook, Noh Min-Young, Nahm Minyeop, Park Jinseok, Lim Su Min, Jang Ja-Hyun, Cho Eun-Hae, Ki Chang-Seok, Lee Seungbok, Kim Seung Hyun

机构信息

Green Cross Genome, Yongin, Republic of Korea.

Department of Neurology, Hanyang University College of Medicine, Seoul, Republic of Korea; Cell Therapy Center, Hanyang University Hospital, Seoul, Republic of Korea.

出版信息

Neurobiol Aging. 2017 Feb;50:170.e1-170.e6. doi: 10.1016/j.neurobiolaging.2016.11.003. Epub 2016 Nov 19.

Abstract

The TANK-binding kinase 1 (TBK1) gene has recently been identified as a novel causative gene of amyotrophic lateral sclerosis (ALS). This study aims to determine the frequency and spectrum of TBK1 variants and their functional implications in Korean patients with sporadic ALS (sALS). TBK1 sequences were analyzed in 129 consecutive patients with sALS using either multigene panel or exome sequencing. One frameshift (c.1414delA) and 3 missense variants of uncertain significance in TBK1 were found in 4 patients each. In vitro functional studies revealed that the c.1414delA (p.Ile472Serfs*8) variant was associated with reduced mRNA expression of TBK1. Moreover, protein expression of this variant in patient-derived fibroblasts disrupted binding to autophagy adapter proteins and inhibited the function of TBK1 in HEK293T cells. In contrast, the 3 other missense variants of uncertain significance showed normal mRNA expression and no abnormalities in protein function. Based on these findings, the frequency of pathogenic TBK1 variants in Korean sALS patients was estimated to be 0.8% (1/129). In conclusion, pathogenic variants in TBK1 are rare but could be responsible for sALS in a small number of Korean patients.

摘要

TANK结合激酶1(TBK1)基因最近被鉴定为肌萎缩侧索硬化症(ALS)的一个新的致病基因。本研究旨在确定韩国散发性ALS(sALS)患者中TBK1变异的频率和谱及其功能意义。使用多基因panel或外显子组测序对129例连续的sALS患者的TBK1序列进行分析。在4例患者中分别发现了1个TBK1的移码突变(c.1414delA)和3个意义未明的错义变异。体外功能研究表明,c.1414delA(p.Ile472Serfs*8)变异与TBK1的mRNA表达降低有关。此外,该变异在患者来源的成纤维细胞中的蛋白表达破坏了与自噬衔接蛋白的结合,并抑制了其在HEK293T细胞中的功能。相比之下,其他3个意义未明的错义变异显示出正常的mRNA表达且蛋白功能无异常。基于这些发现,韩国sALS患者中致病性TBK1变异的频率估计为0.8%(1/129)。总之,TBK1中的致病性变异很少见,但可能是少数韩国患者sALS的病因。

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