College of Life Sciences, Anhui Agricultural University, 130 Changjiang West Road, Hefei 230036, Anhui Province, P. R. China.
Sci Rep. 2016 Dec 15;6:39153. doi: 10.1038/srep39153.
The complete mitochondrial genome (mitogenome) of Leucoma salicis (Lepidoptera: Lymantriidae) was sequenced and annotated. It is a circular molecule of 15,334 bp, containing the 37 genes usually present in insect mitogenomes. All protein-coding genes (PCGs) are initiated by ATN codons, other than cox1, which is initiated by CGA. Three of the 13 PCGs had an incomplete termination codon, T or TA, while the others terminated with TAA. The relative synonymous codon usage of the 13 protein-coding genes (PCGs) was consistent with those of published lepidopteran sequences. All tRNA genes had typical clover-leaf secondary structures, except for the tRNA (AGN), in which the dihydrouridine (DHU) arm could not form a stable stem-loop structure. The A + T-rich region of 325 bp had several distinctive features, including the motif 'ATAGA' followed by an 18 bp poly-T stretch, a microsatellite-like (AT) element, and an 11-bp poly-A present immediately upstream of tRNA. Relationships among 32 insect species were determined using Maximum Likelihood (ML), Neighbor Joining (NJ) and Bayesian Inference (BI) phylogenetic methods. These analyses confirm that L. salicis belongs to the Lymantriidae; and that Lymantriidae is a member of Noctuoidea, and is a sister taxon to Erebidae, Nolidae and Noctuidae, most closely related to Erebidae.
柳毒蛾(鳞翅目:毒蛾科)的完整线粒体基因组(mitogenome)被测序并注释。它是一个 15334bp 的圆形分子,包含昆虫线粒体基因组中通常存在的 37 个基因。除了 cox1 以 CGA 起始外,所有蛋白质编码基因(PCGs)都以 ATN 密码子起始。13 个 PCGs 中有 3 个具有不完整的终止密码子 T 或 TA,而其他的则以 TAA 终止。13 个蛋白质编码基因(PCGs)的相对同义密码子使用与已发表的鳞翅目序列一致。所有 tRNA 基因都具有典型的三叶草二级结构,除了 tRNA(AGN),其中双氢尿嘧啶(DHU)臂不能形成稳定的茎环结构。325bp 的 A+T 丰富区具有几个独特的特征,包括 'ATAGA' 之后的 motif 紧接着是 18bp 的多 T 延伸、微卫星样(AT)元件和 tRNA 上游立即存在的 11bp 多 A。使用最大似然法(ML)、邻接法(NJ)和贝叶斯推断(BI)系统发育方法确定了 32 种昆虫物种之间的关系。这些分析证实,柳毒蛾属于毒蛾科;毒蛾科是 Noctuoidea 的一个成员,是 Erebidae、Nolidae 和 Noctuidae 的姐妹分类群,与 Erebidae 最密切相关。