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(昆虫纲:夜蛾科:Hypenodinae)完整线粒体基因组特征及其系统发育意义。

Complete Mitochondrial Genome Characterization of (Insecta: Erebidae: Hypenodinae) and Its Phylogenetic Implication.

机构信息

Key Laboratory of Green Prevention and Control on Fruits and Vegetables in South China Ministry of Agriculture and Rural Affairs/Guangxi Key Laboratory of Biology for Crop Diseases and Insect Pests/Plant Protection Research Institute, Guangxi Academy of Agricultural Sciences, Nanning 530007, China.

College of Mathematics & Information Science, Guiyang University, Guiyang 550005, China.

出版信息

Genes (Basel). 2023 Sep 26;14(10):1867. doi: 10.3390/genes14101867.

Abstract

The pinion-streaked snout is a new potato pest that has recently been recorded in China. In this study, we analyzed the complete mitochondrial genome of . The results revealed the mitogenome (GenBank: OQ181231) to occur as a circular DNA molecule of 16,376 bp with 51.001% AT content, including 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes, and 1 control region. Notably, the PCGs exhibited typical ATN (Met) start codons, including , which deviated from the usual CGA start codon observed in other lepidopteran mitogenomes, and followed the conventional TAN stop codons. The 22 tRNA genes demonstrated the ability to form a cloverleaf structure, with the exception of trnS1-NCU, which lacked the DHU arm present in other Erebidae mitogenomes. Additionally, conserved motifs like "ATAGA + poly-T (19 bp) stretch" and five microsatellite-like elements (TA) were identified in the AT-rich region. The phylogenetic trees revealed that the Hypenodinae subfamily forms an independent lineage closely related to Erebinae and Catocalinae. The comprehensive mitogenome of S. costaestrigalis will greatly enhance future studies focused on the molecular classification and phylogenetic understanding of the Hypenodinae subfamily within the larger family Erebidae.

摘要

叉鼻潜叶甲是一种新的马铃薯害虫,最近在中国被记录。在本研究中,我们分析了. 的完整线粒体基因组。结果显示,该线粒体基因组(GenBank:OQ181231)为 16376bp 的圆形 DNA 分子,具有 51.001%的 AT 含量,包含 13 个蛋白编码基因(PCGs)、22 个转移 RNA(tRNA)基因、2 个核糖体 RNA(rRNA)基因和 1 个控制区。值得注意的是,PCGs 表现出典型的 ATN(Met)起始密码子,包括 ,这与其他鳞翅目线粒体基因组中常见的 CGA 起始密码子不同,而是遵循常规的 TAN 终止密码子。22 个 tRNA 基因表现出形成三叶形结构的能力,除了 trnS1-NCU 外,它缺乏其他 Erebidae 线粒体基因组中存在的 DHU 臂。此外,在富含 AT 的区域还鉴定到了“ATAGA+多-T(19bp)延伸”和五个微卫星样元件(TA)等保守基序。系统发育树表明,Hypenodinae 亚科形成一个独立的分支,与 Erebinae 和 Catocalinae 密切相关。S. costaestrigalis 的综合线粒体基因组将极大地促进未来对 Hypenodinae 亚科在更大的 Erebidae 家族中的分子分类和系统发育理解的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1efd/10606299/621df972118f/genes-14-01867-g001a.jpg

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