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静止状态下的存活需要AGO相关小RNA对Clr4/SUV39H进行常染色质部署。

Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs.

作者信息

Joh Richard I, Khanduja Jasbeer S, Calvo Isabel A, Mistry Meeta, Palmieri Christina M, Savol Andrej J, Ho Sui Shannan J, Sadreyev Ruslan I, Aryee Martin J, Motamedi Mo

机构信息

Massachusetts General Hospital Center for Cancer Research and Department of Medicine, Harvard Medical School, Charlestown, MA 02129, USA.

Bioinformatics Core, Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA 02115, USA.

出版信息

Mol Cell. 2016 Dec 15;64(6):1088-1101. doi: 10.1016/j.molcel.2016.11.020.

DOI:10.1016/j.molcel.2016.11.020
PMID:27984744
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5180613/
Abstract

Quiescence (G0) is a ubiquitous stress response through which cells enter reversible dormancy, acquiring distinct properties including reduced metabolism, resistance to stress, and long life. G0 entry involves dramatic changes to chromatin and transcription of cells, but the mechanisms coordinating these processes remain poorly understood. Using the fission yeast, here, we track G0-associated chromatin and transcriptional changes temporally and show that as cells enter G0, their survival and global gene expression programs become increasingly dependent on Clr4/SUV39H, the sole histone H3 lysine 9 (H3K9) methyltransferase, and RNAi proteins. Notably, G0 entry results in RNAi-dependent H3K9 methylation of several euchromatic pockets, prior to which Argonaute1-associated small RNAs from these regions emerge. Overall, our data reveal another function for constitutive heterochromatin proteins (the establishment of the global G0 transcriptional program) and suggest that stress-induced alterations in Argonaute-associated sRNAs can target the deployment of transcriptional regulatory proteins to specific sequences.

摘要

静止期(G0)是一种普遍存在的应激反应,通过这种反应细胞进入可逆性休眠状态,获得包括代谢降低、抗应激能力和长寿等独特特性。进入G0期涉及染色质和细胞转录的显著变化,但协调这些过程的机制仍知之甚少。在此,我们利用裂殖酵母,对与G0相关的染色质和转录变化进行了时间追踪,结果表明,随着细胞进入G0期,它们的存活和全局基因表达程序越来越依赖于Clr4/SUV39H(唯一的组蛋白H3赖氨酸9(H3K9)甲基转移酶)和RNAi蛋白。值得注意的是,进入G0期会导致几个常染色质区域发生RNAi依赖的H3K9甲基化,在此之前,来自这些区域的与AGO1相关的小RNA会出现。总体而言,我们的数据揭示了组成型异染色质蛋白的另一个功能(全局G0转录程序的建立),并表明应激诱导的AGO相关小RNA的改变可以将转录调节蛋白部署到特定序列。

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本文引用的文献

1
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2
Nuclear Noncoding RNAs and Genome Stability.核非编码RNA与基因组稳定性
Mol Cell. 2016 Jul 7;63(1):7-20. doi: 10.1016/j.molcel.2016.06.011.
3
Regulation of Skeletal Muscle Stem Cell Quiescence by Suv4-20h1-Dependent Facultative Heterochromatin Formation.Suv4-20h1 依赖性兼性异染色质形成对骨骼肌干细胞静止的调控。
静止细胞中的表观基因组图谱揭示了H3K4me3在RNA聚合酶II活性调控中的关键作用。
Epigenomes. 2024 Oct 22;8(4):39. doi: 10.3390/epigenomes8040039.
4
The fission yeast ortholog of Coilin, Mug174, forms Cajal body-like nuclear condensates and is essential for cellular quiescence.酿酒酵母中与 Coilin 同源的蛋白 Mug174 形成 Cajal 体样核凝聚体,对于细胞静止期是必需的。
Nucleic Acids Res. 2024 Aug 27;52(15):9174-9192. doi: 10.1093/nar/gkae463.
5
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Cell. 2024 Jun 20;187(13):3262-3283.e23. doi: 10.1016/j.cell.2024.04.042. Epub 2024 May 29.
6
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Noncoding RNA. 2024 Mar 29;10(2):19. doi: 10.3390/ncrna10020019.
7
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PLoS Comput Biol. 2024 Apr 10;20(4):e1012027. doi: 10.1371/journal.pcbi.1012027. eCollection 2024 Apr.
8
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Cell Cycle. 2023 Sep;22(17):1921-1936. doi: 10.1080/15384101.2023.2249705. Epub 2023 Aug 27.
9
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Cell Stem Cell. 2016 Feb 4;18(2):229-42. doi: 10.1016/j.stem.2015.11.002. Epub 2015 Dec 5.
4
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5
Rrp6: Integrated roles in nuclear RNA metabolism and transcription termination.Rrp6:在核RNA代谢和转录终止中的综合作用。
Wiley Interdiscip Rev RNA. 2016 Jan-Feb;7(1):91-104. doi: 10.1002/wrna.1317. Epub 2015 Nov 26.
6
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Mol Cell. 2015 Sep 3;59(5):732-43. doi: 10.1016/j.molcel.2015.07.014. Epub 2015 Aug 20.
7
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Cold Spring Harb Perspect Biol. 2015 Aug 3;7(8):a019323. doi: 10.1101/cshperspect.a019323.
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9
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PLoS Genet. 2014 Sep 18;10(9):e1004661. doi: 10.1371/journal.pgen.1004661. eCollection 2014 Sep.