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单向转运体底物结合与转运:重新阐述机制问题。

Uniporter substrate binding and transport: reformulating mechanistic questions.

作者信息

Zhang Xuejun C, Han Lei

机构信息

National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101 China.

出版信息

Biophys Rep. 2016;2(2):45-54. doi: 10.1007/s41048-016-0030-7. Epub 2016 Oct 27.

Abstract

Transporters are involved in material transport, signaling, and energy input in all living cells. One of the fundamental questions about transporters is concerned with the precise role of their substrate in driving the transport process. This is particularly important for uniporters, which must utilize the chemical potential of substrate as the only energy source driving the transport. Thus, uniporters present an excellent model for the understanding of how the difference in substrate concentration across the membrane is used as a driving force. Local conformational changes induced by substrate binding are widely considered as the main mechanism to drive the functional cycle of a transporter; in addition, reducing the energy barrier of the transition state has also been proposed to drive the transporter. However, both points of view require modification to allow consolidation with fundamental thermodynamic principles. Here, we discuss the relationship between thermodynamics and kinetics of uniporters. Substrate binding-induced reduction of the transition-state energy barrier accelerates the transport process in kinetic terms, while the chemical potential of the substrate drives the process thermodynamically.

摘要

转运蛋白参与所有活细胞中的物质运输、信号传导和能量输入。关于转运蛋白的一个基本问题涉及其底物在驱动运输过程中的确切作用。这对于单向转运蛋白尤为重要,因为单向转运蛋白必须利用底物的化学势作为驱动运输的唯一能量来源。因此,单向转运蛋白为理解跨膜底物浓度差异如何用作驱动力提供了一个绝佳的模型。底物结合引起的局部构象变化被广泛认为是驱动转运蛋白功能循环的主要机制;此外,也有人提出降低过渡态的能量屏障来驱动转运蛋白。然而,这两种观点都需要修正,以便与基本热力学原理相结合。在这里,我们讨论单向转运蛋白的热力学和动力学之间的关系。底物结合引起的过渡态能量屏障的降低在动力学上加速了运输过程,而底物的化学势在热力学上驱动了这一过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/57f7/5138270/757f4797aa12/41048_2016_30_Fig1_HTML.jpg

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