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由肌动蛋白和微管蛋白折叠形成的细丝的结构复杂性。

Structural complexity of filaments formed from the actin and tubulin folds.

作者信息

Jiang Shimin, Ghoshdastider Umesh, Narita Akihiro, Popp David, Robinson Robert C

机构信息

Institute of Molecular and Cell Biology, ASTAR (Agency for Science, Technology and Research) , Biopolis, Singapore.

Nagoya University Graduate School of Science, Structural Biology Research Center and Division of Biological Sciences , Furo-cho , Chikusa-ku, Nagoya, Japan.

出版信息

Commun Integr Biol. 2016 Nov 23;9(6):e1242538. doi: 10.1080/19420889.2016.1242538. eCollection 2016.

Abstract

From yeast to man, an evolutionary distance of 1.3 billion years, the F-actin filament structure has been conserved largely in line with the 94% sequence identity. The situation is entirely different in bacteria. In comparison to eukaryotic actins, the bacterial actin-like proteins (ALPs) show medium to low levels of sequence identity. This is extreme in the case of the ParM family of proteins, which often display less than 20% identity. ParMs are plasmid segregation proteins that form the polymerizing motors that propel pairs of plasmids to the extremities of a cell prior to cell division, ensuring faithful inheritance of the plasmid. Recently, exotic ParM filament structures have been elucidated that show ParM filament geometries are not limited to the standard polar pair of strands typified by actin. Four-stranded non-polar ParM filaments existing as open or closed nanotubules are found in and , respectively. These diverse architectures indicate that the actin fold is capable of forming a large variety of filament morphologies, and that the conception of the "actin" filament has been heavily influenced by its conservation in eukaryotes. Here, we review the history of the structure determination of the eukaryotic actin filament to give a sense of context for the discovery of the new ParM filament structures. We describe the novel ParM geometries and predict that even more complex actin-like filaments may exist in bacteria. Finally, we compare the architectures of filaments arising from the actin and tubulin folds and conclude that the basic units possess similar properties that can each form a range of structures. Thus, the use of the actin fold in microfilaments and the tubulin fold for microtubules likely arose from a wider range of filament possibilities, but became entrenched as those architectures in early eukaryotes.

摘要

从酵母到人类,进化距离长达13亿年,F-肌动蛋白丝结构在很大程度上得以保留,序列同一性达94%。而细菌的情况则完全不同。与真核肌动蛋白相比,细菌肌动蛋白样蛋白(ALP)的序列同一性处于中等至较低水平。在ParM蛋白家族中这种情况尤为极端,其序列同一性常常低于20%。ParM是质粒分离蛋白,可形成聚合马达,在细胞分裂前将成对的质粒推向细胞两端,确保质粒的忠实遗传。最近,已阐明了奇异的ParM丝结构,显示ParM丝的几何形状不限于肌动蛋白典型的标准极性双链。分别在[具体文献1]和[具体文献2]中发现了以开放或封闭纳米管形式存在的四链非极性ParM丝。这些多样的结构表明肌动蛋白折叠能够形成多种丝形态,并且“肌动蛋白”丝的概念在很大程度上受到其在真核生物中保守性的影响。在此,我们回顾真核肌动蛋白丝结构测定的历史,以便为新ParM丝结构的发现提供背景信息。我们描述了新颖的ParM几何形状,并预测细菌中可能存在更复杂的肌动蛋白样丝。最后,我们比较了由肌动蛋白和微管蛋白折叠产生的丝的结构,并得出结论,基本单元具有相似的特性,各自都能形成一系列结构。因此,微丝中肌动蛋白折叠的使用以及微管中微管蛋白折叠的使用可能源于更广泛的丝的可能性,但在早期真核生物中这些结构得以固定下来。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/79a6/5193048/982c11b10826/kcib-09-06-1242538-g001.jpg

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