Okuda Tetsuya
Bio-design research group, Bioproduction research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Central 6, 1-1-1 Higashi, Tsukuba 305-8566, Ibaraki, Japan.
Data Brief. 2016 Dec 9;10:449-453. doi: 10.1016/j.dib.2016.12.001. eCollection 2017 Feb.
Protein modification by -linked -acetylglucosamine (-GlcNAcylation) is one of the post transcriptional modifications occurring on cellular proteins. This paper provides a data set relating to the -GlcNAcylation of cellular proteins detected by RL2 and CTD110.6 antibodies, which are commonly used for detection of protein -GlcNAcylation, in 2-deoxy-d-glucose (2DG)-treated human teratocarcinoma NCCIT cells in support of the research article entitled "A novel, promoter-based, target-specific assay identifies 2-deoxy-d-glucose as an inhibitor of globotriaosylceramide biosynthesis" (Okuda et al., 2009) [1]. The main article described a suppressive effect of 2DG on an Sp1 target gene in NCCIT cells and discussed the relationship between the effect of 2DG and -GlcNAcylation status of Sp1. The data in this paper complements this relationship by Western blotting and clearly showed that the 2DG treatment increased -GlcNAcylation of cellular proteins in NCCIT cells, whereas the RL2 and CTD110.6 epitopes were detected in a different manner. The RL2 epitope was detected on Sp1 during 2DG treatment, and the level was transiently increased at 24 h. In contrast, the CTD110.6 epitope became detectable on Sp1 over 72 h after 2DG treatment, and then the other proteins containing CTD110.6 epitopes also appeared in the cell lysates and the anti-Sp1 antibody precipitates.
通过β-连接的N-乙酰葡糖胺(O-GlcNAcylation)对蛋白质进行修饰是发生在细胞蛋白质上的转录后修饰之一。本文提供了一个数据集,该数据集与在2-脱氧-D-葡萄糖(2DG)处理的人畸胎瘤NCCIT细胞中,通过RL2和CTD110.6抗体检测到的细胞蛋白质的O-GlcNAcylation有关,这两种抗体常用于检测蛋白质的O-GlcNAcylation,以支持题为《一种基于启动子的新型靶向特异性检测方法鉴定2-脱氧-D-葡萄糖为球三糖神经酰胺生物合成抑制剂》(奥田等人,2009年)[1]的研究文章。主要文章描述了2DG对NCCIT细胞中一个Sp1靶基因的抑制作用,并讨论了2DG的作用与Sp1的O-GlcNAcylation状态之间的关系。本文中的数据通过蛋白质印迹法补充了这种关系,并清楚地表明,2DG处理增加了NCCIT细胞中细胞蛋白质的O-GlcNAcylation,而RL2和CTD110.6表位的检测方式不同。在2DG处理期间,在Sp1上检测到RL2表位,其水平在24小时时短暂升高。相比之下,在2DG处理72小时后,Sp1上可检测到CTD110.6表位,然后细胞裂解物和抗Sp1抗体沉淀物中也出现了其他含有CTD110.6表位的蛋白质。