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北极奈瑟菌新种,分离自北极阿拉斯加白额雁(Anser albifrons)死亡卵。

Neisseria arctica sp. nov., isolated from nonviable eggs of greater white-fronted geese (Anser albifrons) in Arctic Alaska.

机构信息

Department of Veterinary Medicine, University of Alaska Fairbanks, Fairbanks, AK, USA.

U.S. Geological Survey, Alaska Science Center, Anchorage, AK, USA.

出版信息

Int J Syst Evol Microbiol. 2017 May;67(5):1115-1119. doi: 10.1099/ijsem.0.001773. Epub 2017 Jun 5.

Abstract

During the summers of 2013 and 2014, isolates of a novel Gram-stain-negative coccus in the genus Neisseriawere obtained from the contents of nonviable greater white-fronted goose (Anseralbifrons) eggs on the Arctic Coastal Plain of Alaska. We used a polyphasic approach to determine whether these isolates represent a novel species. 16S rRNA gene sequences, 23S rRNA gene sequences, and chaperonin 60 gene sequences suggested that these Alaskan isolates are members of a distinct species that is most closely related to Neisseria canis, Neisseriaanimaloris and Neisseriashayeganii. Analysis of the rplF gene additionally showed that the isolates are unique and most closely related to Neisseriaweaveri. Average nucleotide identity of the whole genome sequence of the type strain was between 71.5 and 74.6 % compared to close relatives, further supporting designation as a novel species. Fatty acid methyl ester analysis showed a predominance of C14 : 0, C16 : 0 and C16 : 1ω7c fatty acids. Finally, biochemical characteristics distinguished the isolates from other species of the genus Neisseria. On the basis of these combined data, the isolates are proposed to represent a novel species of the genus Neisseria, with the name Neisseria arctica sp. nov. The type strain is KH1503T (=ATCC TSD-57T=DSM 103136T).

摘要

在 2013 年和 2014 年的夏季,从阿拉斯加北极沿海平原上无活力的大白额雁(Anser albifrons)卵的内容物中获得了一种新型革兰氏阴性球菌属奈瑟菌的分离物。我们使用多相方法来确定这些分离物是否代表一种新型物种。16S rRNA 基因序列、23S rRNA 基因序列和伴侣蛋白 60 基因序列表明,这些阿拉斯加分离物是一个独特物种的成员,与犬奈瑟菌、动物奈瑟菌和海耶氏奈瑟菌最为密切相关。rplF 基因分析还表明,这些分离物是独特的,与奈瑟氏魏氏菌最为密切相关。与近亲相比,模式株全基因组序列的平均核苷酸同一性在 71.5%至 74.6%之间,进一步支持将其指定为一个新型物种。脂肪酸甲酯分析显示 C14:0、C16:0 和 C16:1ω7c 脂肪酸占优势。最后,生化特征将这些分离物与奈瑟菌属的其他物种区分开来。基于这些综合数据,这些分离物被提议代表奈瑟菌属的一个新型物种,命名为北极奈瑟菌 sp. nov. 模式株为 KH1503T(=ATCC TSD-57T=DSM 103136T)。

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