Khan Ibrar, Qayyum Sadia, Ahmed Shehzad, Maqbool Farhana, Tauseef Isfahan, Haleem Kashif Syed, Chi Zhen-Ming
Department of Microbiology, Hazara University, 21300 Mansehra, Pakistan; UNESCO Chinese Center of Marine Biotechnology, Ocean University of China, Qingdao 266003, China.
Department of Microbiology, Hazara University, 21300 Mansehra, Pakistan.
Gene. 2017 Mar 20;605:81-91. doi: 10.1016/j.gene.2016.12.036. Epub 2017 Jan 3.
In this study, a pyruvate carboxylase gene (PYC) from a marine fungus Penicillium viticola 152 isolated from marine algae was cloned and characterized by using Genome Walking method. An open reading frame (ORF) of The PYC gene (accession number: KM593097) had 3582bp encoding 1193 amino acid protein (isoelectric point: 5.01) with a calculated molecular weight of 131.2757kDa. A putative promoter (intronless) of the gene was located at -666bp and contained a TATA box, several CAAT boxes, the 5'-SYGGRG-3' and a 5'-HGATAR-3' sequences. A consensus polyadenylation site (AATAAA) was also observed at +10bp downstream of the ORF. The protein deduced from the PYC gene had no signal peptide, was a homotetramer (4), and had the four functional domains. Furthermore, PYC protein also had three potential N-linked glycosylation sites, among them, -N-S-T-I- at 36 amino acid, -N-G-T-V- at 237 amino acid, and -N-G-S-S- at 517 amino acid were the most possible N-glycosylation sites. After expression of the PYC gene of P. viticola 152 in medium supplemented with CSL and biotin, it was found that the specific pyruvate carboxylase activity in MA production medium supplemented with CSL was much higher (0.5U/mg) than in MA medium supplemented with biotin (0.3U/mg), suggesting that optimal concentration of CSL is required for increased expression of the PYC gene, which is responsible for high level production of malic acid in P. viticola 152 strain.
在本研究中,采用基因组步移法克隆并鉴定了从海藻中分离得到的海洋真菌葡萄穗霉152(Penicillium viticola 152)的丙酮酸羧化酶基因(PYC)。PYC基因(登录号:KM593097)的开放阅读框(ORF)为3582bp,编码1193个氨基酸的蛋白质(等电点:5.01),计算分子量为131.2757kDa。该基因的一个推定启动子(无内含子)位于-666bp处,包含一个TATA盒、几个CAAT盒、5'-SYGGRG-3'和一个5'-HGATAR-3'序列。在ORF下游+10bp处还观察到一个共有聚腺苷酸化位点(AATAAA)。由PYC基因推导的蛋白质没有信号肽,是一个同四聚体(4),并具有四个功能结构域。此外,PYC蛋白还有三个潜在的N-糖基化位点,其中,第36位氨基酸处的-N-S-T-I-、第237位氨基酸处的-N-G-T-V-和第517位氨基酸处的-N-G-S-S-是最可能的N-糖基化位点。在添加了玉米浆(CSL)和生物素的培养基中表达葡萄穗霉152的PYC基因后,发现在添加了CSL的苹果酸生产培养基中的丙酮酸羧化酶比活(0.5U/mg)比添加生物素的苹果酸培养基(0.3U/mg)高得多,这表明PYC基因的表达增加需要最佳浓度的CSL,而PYC基因负责葡萄穗霉152菌株中苹果酸的高水平生产。