Poon Kar Lai, Wang Xingang, Lee Serene G P, Ng Ashley S, Goh Wei Huang, Zhao Zhonghua, Al-Haddawi Muthafar, Wang Haishan, Mathavan Sinnakaruppan, Ingham Philip W, McGinnis Claudia, Carney Tom J
Institute of Molecular and Cell Biology (IMCB), A*STAR (Agency for Science, Technology and Research), 61 Biopolis Drive, 138673 Singapore.
Genome Institute of Singapore, A*STAR (Agency for Science, Technology and Research), 60 Biopolis Street, 138672 Singapore.
Toxicol Sci. 2017 Mar 1;156(1):133-148. doi: 10.1093/toxsci/kfw250.
Organ toxicity, particularly liver toxicity, remains one of the major reasons for the termination of drug candidates in the development pipeline as well as withdrawal or restrictions of marketed drugs. A screening-amenable alternative in vivo model such as zebrafish would, therefore, find immediate application in the early prediction of unacceptable organ toxicity. To identify highly upregulated genes as biomarkers of toxic responses in the zebrafish model, a set of well-characterized reference drugs that cause drug-induced liver injury (DILI) in the clinic were applied to zebrafish larvae and adults. Transcriptome microarray analysis was performed on whole larvae or dissected adult livers. Integration of data sets from different drug treatments at different stages identified common upregulated detoxification pathways. Within these were candidate biomarkers which recurred in multiple treatments. We prioritized 4 highly upregulated genes encoding enzymes acting in distinct phases of the drug metabolism pathway. Through promoter isolation and fosmid recombineering, eGFP reporter transgenic zebrafish lines were generated and evaluated for their response to DILI drugs. Three of the 4 generated reporter lines showed a dose and time-dependent induction in endodermal organs to reference drugs and an expanded drug set. In conclusion, through integrated transcriptomics and transgenic approaches, we have developed parallel independent zebrafish in vivo screening platforms able to predict organ toxicities of preclinical drugs.
器官毒性,尤其是肝脏毒性,仍然是药物研发过程中候选药物被终止以及已上市药物被撤市或受限的主要原因之一。因此,一种易于筛选的体内替代模型,如斑马鱼,将立即应用于早期预测不可接受的器官毒性。为了在斑马鱼模型中鉴定高度上调的基因作为毒性反应的生物标志物,将一组在临床上会导致药物性肝损伤(DILI)的特征明确的参考药物应用于斑马鱼幼虫和成虫。对整个幼虫或解剖后的成年肝脏进行转录组微阵列分析。整合不同药物在不同阶段处理的数据集,确定了共同上调的解毒途径。其中有在多种处理中反复出现的候选生物标志物。我们对4个高度上调的基因进行了优先排序,这些基因编码在药物代谢途径不同阶段起作用的酶。通过启动子分离和fosmid重组工程,构建了eGFP报告基因转基因斑马鱼品系,并评估了它们对DILI药物的反应。所构建的4个报告基因品系中有3个在内胚层器官中对参考药物和一组扩展药物呈现出剂量和时间依赖性诱导。总之,通过整合转录组学和转基因方法,我们开发了能够预测临床前药物器官毒性的平行独立斑马鱼体内筛选平台。