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走出婆罗洲:波罗蜜属(桑科)的生物地理学、系统发育及分歧时间估计

Out of Borneo: biogeography, phylogeny and divergence date estimates of Artocarpus (Moraceae).

作者信息

Williams Evelyn W, Gardner Elliot M, Harris Robert, Chaveerach Arunrat, Pereira Joan T, Zerega Nyree J C

机构信息

Chicago Botanic Garden, Plant Science and Conservation, 1000 Lake Cook Road, Glencoe, IL 60022, USA.

Northwestern University, Plant Biology and Conservation Program, 2205 Tech Dr., Evanston, IL 60208, USA.

出版信息

Ann Bot. 2017 Mar 1;119(4):611-627. doi: 10.1093/aob/mcw249.

Abstract

BACKGROUND AND AIMS

The breadfruit genus ( Artocarpus , Moraceae) includes valuable underutilized fruit tree crops with a centre of diversity in Southeast Asia. It belongs to the monophyletic tribe Artocarpeae, whose only other members include two small neotropical genera. This study aimed to reconstruct the phylogeny, estimate divergence dates and infer ancestral ranges of Artocarpeae, especially Artocarpus , to better understand spatial and temporal evolutionary relationships and dispersal patterns in a geologically complex region.

METHODS

To investigate the phylogeny and biogeography of Artocarpeae, this study used Bayesian and maximum likelihood approaches to analyze DNA sequences from six plastid and two nuclear regions from 75% of Artocarpus species, both neotropical Artocarpeae genera, and members of all other Moraceae tribes. Six fossil-based calibrations within the Moraceae family were used to infer divergence times. Ancestral areas and estimated dispersal events were also inferred.

KEY RESULTS

Artocarpeae, Artocarpus and four monophyletic Artocarpus subgenera were well supported. A late Cretaceous origin of the Artocarpeae tribe in the Americas is inferred, followed by Eocene radiation of Artocarpus in Asia, with the greatest diversification occurring during the Miocene. Borneo is reconstructed as the ancestral range of Artocarpus , with dozens of independent in situ diversification events inferred there, as well as dispersal events to other regions of Southeast Asia. Dispersal pathways of Artocarpus and its ancestors are proposed.

CONCLUSIONS

Borneo was central in the diversification of the genus Artocarpus and probably served as the centre from which species dispersed and diversified in several directions. The greatest amount of diversification is inferred to have occurred during the Miocene, when sea levels fluctuated and land connections frequently existed between Borneo, mainland Asia, Sumatra and Java. Many species found in these areas have extant overlapping ranges, suggesting that sympatric speciation may have occurred. By contrast, Artocarpus diversity east of Borneo (where many of the islands have no historical connections to the landmasses of the Sunda and Sahul shelves) is unique and probably the product of over water long-distance dispersal events and subsequent diversification in allopatry. This work represents the most comprehensive Artocarpus phylogeny and biogeography study to date and supports Borneo as an evolutionary biodiversity hotspot.

摘要

背景与目的

面包果属(桑科波罗蜜属)包含一些未得到充分利用的珍贵果树作物,其多样性中心位于东南亚。它属于单系的波罗蜜族,该族仅有的其他成员包括两个新热带小属。本研究旨在重建波罗蜜族,特别是波罗蜜属的系统发育,估计分歧时间并推断其祖先分布范围,以更好地理解地质复杂区域中的时空进化关系和扩散模式。

方法

为研究波罗蜜族的系统发育和生物地理学,本研究采用贝叶斯法和最大似然法,分析了波罗蜜属75%的物种、新热带波罗蜜族两个属以及所有其他桑科部落成员的六个质体区域和两个核区域的DNA序列。利用桑科内六个基于化石的校准来推断分歧时间。还推断了祖先分布区域和估计的扩散事件。

关键结果

波罗蜜族、波罗蜜属以及四个单系的波罗蜜属亚属得到了有力支持。推断波罗蜜族起源于晚白垩世的美洲,随后在始新世波罗蜜属在亚洲辐射,最大程度的多样化发生在中新世。婆罗洲被重建为波罗蜜属的祖先分布范围,推断在那里发生了数十次独立的原地多样化事件以及向东南亚其他地区的扩散事件。提出了波罗蜜属及其祖先的扩散途径。

结论

婆罗洲在波罗蜜属的多样化过程中处于中心地位,可能是物种向多个方向扩散和多样化的中心。推断最大程度的多样化发生在中新世,当时海平面波动,婆罗洲、亚洲大陆、苏门答腊岛和爪哇之间经常存在陆桥连接。在这些地区发现的许多物种有现存的重叠分布范围,表明可能发生了同域物种形成。相比之下,婆罗洲以东的波罗蜜属多样性(那里许多岛屿与巽他陆架和萨胡尔陆架的大陆块没有历史联系)是独特的,可能是水上长距离扩散事件及随后异域多样化的产物。这项工作代表了迄今为止最全面的波罗蜜属系统发育和生物地理学研究,并支持婆罗洲作为一个进化生物多样性热点地区。

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