Han Ying, Liu Yuan, Wang Haoyou, Liu Xiangjun
School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China.
College of Life Sciences, Tianjin Normal University, Tianjin, China.
PLoS One. 2017 Jan 30;12(1):e0170695. doi: 10.1371/journal.pone.0170695. eCollection 2017.
Vicia ramuliflora L. is a widely distributed species in Eurasia with high economic value. For past 200 years, it has evolved a tetraploid cytotype and new subspecies at the diploid level. Based on taxonomy, cytogeography and other lines of evidence, previous studies have provided valuable information about the evolution of V. ramuliflora ploidy level, but due to the limited resolution of traditional methods, important questions remain. In this study, fluorescence in situ hybridization (FISH) and random amplified polymorphic DNA (RAPD) were used to analyze the evolution of V. ramuliflora at the diploid and tetraploid levels. Our aim was to reveal the genomic constitution and parents of the tetraploid V. ramuliflora and the relationships among diploid V. ramuliflora populations. Our study showed that the tetraploid cytotype of V. ramuliflora at Changbai Mountains (M) has identical 18S and 5S rDNA distribution patterns with the diploid Hengdaohezi population (B) and the diploid Dailing population (H). However, UPGMA clustering, Neighbor-Joining clustering and principal coordinates analysis based on RAPD showed that the tetraploid cytotype (M) has more close relationships with Qianshan diploid population T. Based on our results and the fact that interspecific hybridization among Vicia species is very difficult, we think that the tetraploid V. ramuliflora is an autotetraploid and its genomic origin still needs further study. In addition, our study also found that Qianshan diploid population (T) had evolved distinct new traits compared with other diploid populations, which hints that V. ramuliflora evolved further at diploid level. We suggest that diploid population T be re-classified as a new subspecies.
多枝野豌豆是一种在欧亚大陆广泛分布且具有高经济价值的物种。在过去的200年里,它在二倍体水平上进化出了四倍体细胞型和新的亚种。基于分类学、细胞地理学及其他证据线索,先前的研究已经提供了关于多枝野豌豆倍性水平进化的有价值信息,但由于传统方法分辨率有限,重要问题仍然存在。在本研究中,荧光原位杂交(FISH)和随机扩增多态性DNA(RAPD)被用于分析二倍体和四倍体水平上的多枝野豌豆的进化。我们的目的是揭示四倍体多枝野豌豆的基因组构成和亲本以及二倍体多枝野豌豆种群之间的关系。我们的研究表明,长白山(M)的四倍体多枝野豌豆细胞型与二倍体横道河子种群(B)和二倍体带岭种群(H)具有相同的18S和5S rDNA分布模式。然而,基于RAPD的UPGMA聚类、邻接法聚类和主坐标分析表明,四倍体细胞型(M)与千山二倍体种群T的关系更为密切。基于我们的结果以及野豌豆属物种间种间杂交非常困难这一事实,我们认为四倍体多枝野豌豆是同源四倍体,其基因组起源仍需进一步研究。此外,我们的研究还发现,千山二倍体种群(T)与其他二倍体种群相比已经进化出了明显的新性状,这暗示多枝野豌豆在二倍体水平上进一步进化。我们建议将二倍体种群T重新分类为一个新的亚种。