• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种新型 RpoB 点突变可提高大肠杆菌的耐渗压能力和琥珀酸产量。

A novel point mutation in RpoB improves osmotolerance and succinic acid production in Escherichia coli.

机构信息

Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.

Key Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, 32 West 7th Ave, Tianjin Airport Economic Park, Tianjin, 300308, China.

出版信息

BMC Biotechnol. 2017 Feb 13;17(1):10. doi: 10.1186/s12896-017-0337-6.

DOI:10.1186/s12896-017-0337-6
PMID:28193207
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5307762/
Abstract

BACKGROUND

Escherichia coli suffer from osmotic stress during succinic acid (SA) production, which reduces the performance of this microbial factory.

RESULTS

Here, we report that a point mutation leading to a single amino acid change (D654Y) within the β-subunit of DNA-dependent RNA polymerase (RpoB) significantly improved the osmotolerance of E. coli. Importation of the D654Y mutation of RpoB into the parental strain, Suc-T110, increased cell growth and SA production by more than 40% compared to that of the control under high glucose osmolality. The transcriptome profile, determined by RNA-sequencing, showed two distinct stress responses elicited by the mutated RpoB that counterbalanced the osmotic stress. Under non-stressed conditions, genes involved in the synthesis and transport of compatible solutes such as glycine-betaine, glutamate or proline were upregulated even without osmotic stimulation, suggesting a "pre-defense" mechanism maybe formed in the rpoB mutant. Under osmotic stressed conditions, genes encoding diverse sugar transporters, which should be down-regulated in the presence of high osmotic pressure, were derepressed in the rpoB mutant. Additional genetic experiments showed that enhancing the expression of the mal regulon, especially for genes that encode the glycoporin LamB and maltose transporter, contributed to the osmotolerance phenotype.

CONCLUSIONS

The D654Y single amino acid substitution in RpoB rendered E. coli cells resistant to osmotic stress, probably due to improved cell growth and viability via enhanced sugar uptake under stressed conditions, and activated a potential "pre-defense" mechanism under non-stressed conditions. The findings of this work will be useful for bacterial host improvement to enhance its resistance to osmotic stress and facilitate bio-based organic acids production.

摘要

背景

大肠杆菌在琥珀酸(SA)生产过程中会遭受渗透压胁迫,从而降低这种微生物工厂的性能。

结果

在这里,我们报告称,DNA 依赖性 RNA 聚合酶(RpoB)β亚基中的一个点突变导致单个氨基酸变化(D654Y),可显著提高大肠杆菌的渗透压耐受性。与对照相比,将 RpoB 的 D654Y 突变导入亲本菌株 Suc-T110 中,在高葡萄糖渗透压下,细胞生长和 SA 产量增加了 40%以上。通过 RNA 测序确定的转录组谱显示,突变的 RpoB 引发了两种截然不同的应激反应,这两种反应抵消了渗透压胁迫。在非胁迫条件下,即使没有渗透压刺激,参与甘氨酸甜菜碱、谷氨酸或脯氨酸等相容溶质合成和运输的基因也被上调,这表明 rpoB 突变体可能形成了“预先防御”机制。在渗透压胁迫条件下,编码各种糖转运蛋白的基因被下调,但在 rpoB 突变体中被解除了抑制。额外的遗传实验表明,增强 mal 调控子的表达,特别是编码糖蛋白 LamB 和麦芽糖转运蛋白的基因,有助于渗透压耐受表型。

结论

RpoB 中的 D654Y 单个氨基酸取代使大肠杆菌细胞对渗透压胁迫具有抗性,这可能是由于在应激条件下通过增强糖摄取来改善细胞生长和活力,并在非应激条件下激活了潜在的“预先防御”机制。这项工作的发现将有助于细菌宿主的改良,以提高其对渗透压胁迫的抗性并促进基于生物的有机酸生产。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/ce241a635be1/12896_2017_337_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/5f41864fc9f7/12896_2017_337_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/5ba9b7e83b28/12896_2017_337_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/1934bdefac90/12896_2017_337_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/9941dbbc300b/12896_2017_337_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/ce241a635be1/12896_2017_337_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/5f41864fc9f7/12896_2017_337_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/5ba9b7e83b28/12896_2017_337_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/1934bdefac90/12896_2017_337_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/9941dbbc300b/12896_2017_337_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb1c/5307762/ce241a635be1/12896_2017_337_Fig5_HTML.jpg

相似文献

1
A novel point mutation in RpoB improves osmotolerance and succinic acid production in Escherichia coli.一种新型 RpoB 点突变可提高大肠杆菌的耐渗压能力和琥珀酸产量。
BMC Biotechnol. 2017 Feb 13;17(1):10. doi: 10.1186/s12896-017-0337-6.
2
Osmotolerance in Escherichia coli Is Improved by Activation of Copper Efflux Genes or Supplementation with Sulfur-Containing Amino Acids.通过激活铜外排基因或补充含硫氨基酸可提高大肠杆菌的渗透压耐受性。
Appl Environ Microbiol. 2017 Mar 17;83(7). doi: 10.1128/AEM.03050-16. Print 2017 Apr 1.
3
Random mutagenesis of global transcription factor cAMP receptor protein for improved osmotolerance.随机突变全局转录因子 cAMP 受体蛋白以提高渗透压耐受性。
Biotechnol Bioeng. 2012 May;109(5):1165-72. doi: 10.1002/bit.24411. Epub 2011 Dec 27.
4
[Isolation of high osmotic-tolerant mutants of Escherichia coli for succinic acid production by metabolic evolution].[通过代谢进化分离用于生产琥珀酸的大肠杆菌高渗透压耐受突变体]
Sheng Wu Gong Cheng Xue Bao. 2012 Nov;28(11):1337-45.
5
[Influence of expressing IrrE from Deinococcus radiodurans on osmotic stress tolerance of succinate-producing Escherichia coli].[表达耐辐射球菌IrrE对产琥珀酸大肠杆菌渗透胁迫耐受性的影响]
Sheng Wu Gong Cheng Xue Bao. 2016 Oct 25;32(10):1372-1380. doi: 10.13345/j.cjb.160114.
6
Evidence for up and down regulation of 450 genes by rpoB12 (rif) mutation and their implications in complexity of transcription modulation in Escherichia coli.rpoB12(rif)突变对 450 个基因的上调和下调调控的证据及其对大肠杆菌转录调控复杂性的影响。
Microbiol Res. 2018 Jul-Aug;212-213:80-93. doi: 10.1016/j.micres.2018.04.009. Epub 2018 Apr 30.
7
Rewiring global regulator cAMP receptor protein (CRP) to improve E. coli tolerance towards low pH.重布线全局调控因子 cAMP 受体蛋白 (CRP) 以提高大肠杆菌对低 pH 的耐受性。
J Biotechnol. 2014 Mar 10;173:68-75. doi: 10.1016/j.jbiotec.2014.01.015. Epub 2014 Jan 19.
8
Expression of cloned rpoB gene of Escherichia coli: a genetic system for the isolation of dominant negative mutations and overproduction of defective beta subunit of RNA polymerase.大肠杆菌克隆rpoB基因的表达:用于分离显性负性突变和过量产生有缺陷的RNA聚合酶β亚基的遗传系统。
J Bacteriol. 1989 Jun;171(6):3002-7. doi: 10.1128/jb.171.6.3002-3007.1989.
9
Ciprofloxacin selects for RNA polymerase mutations with pleiotropic antibiotic resistance effects.环丙沙星会选择出具有多效抗生素耐药性效应的RNA聚合酶突变。
J Antimicrob Chemother. 2017 Jan;72(1):75-84. doi: 10.1093/jac/dkw364. Epub 2016 Sep 12.
10
Rifampin Resistance rpoB Alleles or Multicopy Thioredoxin/Thioredoxin Reductase Suppresses the Lethality of Disruption of the Global Stress Regulator spx in Staphylococcus aureus.利福平抗性rpoB等位基因或多拷贝硫氧还蛋白/硫氧还蛋白还原酶可抑制金黄色葡萄球菌中全局应激调节因子spx缺失的致死性。
J Bacteriol. 2016 Sep 9;198(19):2719-31. doi: 10.1128/JB.00261-16. Print 2016 Oct 1.

引用本文的文献

1
Omics studies reveal the response mechanisms of to l-homoserine osmotic stress.组学研究揭示了[具体对象]对L-高丝氨酸渗透胁迫的响应机制。 (原文中“of”后面缺少具体内容)
3 Biotech. 2025 May;15(5):127. doi: 10.1007/s13205-025-04304-7. Epub 2025 Apr 16.
2
Systems engineering of Escherichia coli for high-level glutarate production from glucose.利用大肠杆菌工程系统从葡萄糖生产高浓度戊二酸。
Nat Commun. 2024 Feb 3;15(1):1032. doi: 10.1038/s41467-024-45448-z.
3
Base editor-mediated large-scale screening of functional mutations in bacteria for industrial phenotypes.

本文引用的文献

1
Production of succinic acid by metabolically engineered microorganisms.通过代谢工程改造的微生物生产琥珀酸。
Curr Opin Biotechnol. 2016 Dec;42:54-66. doi: 10.1016/j.copbio.2016.02.034. Epub 2016 Mar 15.
2
Towards large scale fermentative production of succinic acid.迈向大规模发酵生产琥珀酸。
Curr Opin Biotechnol. 2014 Dec;30:190-7. doi: 10.1016/j.copbio.2014.07.003. Epub 2014 Aug 12.
3
Metabolic evolution of two reducing equivalent-conserving pathways for high-yield succinate production in Escherichia coli.大肠杆菌中用于高产琥珀酸生产的两条还原当量守恒途径的代谢进化
碱基编辑器介导的细菌功能突变大规模筛选及其工业表型。
Sci China Life Sci. 2024 May;67(5):1051-1060. doi: 10.1007/s11427-023-2468-y. Epub 2024 Jan 12.
4
Rifampicin-resistant RpoB S522L Vibrio vulnificus exhibits disturbed stress response and hypervirulence traits.利福平耐药 RpoB S522L 创伤弧菌表现出应激反应紊乱和高毒力特征。
Microbiologyopen. 2023 Oct;12(5):e1379. doi: 10.1002/mbo3.1379.
5
Improved Dual Base Editor Systems (iACBEs) for Simultaneous Conversion of Adenine and Cytosine in the Bacterium Escherichia coli.用于同时在细菌大肠杆菌中转换腺嘌呤和胞嘧啶的改良双碱基编辑器系统(iACBEs)。
mBio. 2023 Feb 28;14(1):e0229622. doi: 10.1128/mbio.02296-22. Epub 2023 Jan 10.
6
A paradigm shift towards production of sustainable bioenergy and advanced products from /hemp biomass in Canada.加拿大从大麻生物质生产可持续生物能源和先进产品的范式转变。
Biomass Convers Biorefin. 2022 Mar 19:1-22. doi: 10.1007/s13399-022-02570-6.
7
Polygenic Adaptation and Clonal Interference Enable Sustained Diversity in Experimental Pseudomonas aeruginosa Populations.多基因适应和克隆干扰使实验性铜绿假单胞菌群体的多样性得以持续。
Mol Biol Evol. 2021 Dec 9;38(12):5359-5375. doi: 10.1093/molbev/msab248.
8
A snapshot of the λ T4rII exclusion (Rex) phenotype in Escherichia coli.λ T4rII 排除(Rex)表型在大肠杆菌中的快照。
Curr Genet. 2021 Oct;67(5):739-745. doi: 10.1007/s00294-021-01183-2. Epub 2021 Apr 20.
9
Improving L-threonine production in Escherichia coli by elimination of transporters ProP and ProVWX.通过消除转运蛋白 ProP 和 ProVWX 来提高大肠杆菌中 L-苏氨酸的产量。
Microb Cell Fact. 2021 Mar 2;20(1):58. doi: 10.1186/s12934-021-01546-x.
10
mutations conferring rifampicin-resistance affect growth, stress response and motility in .导致利福平耐药的突变影响 的生长、应激反应和运动性。
Microbiology (Reading). 2020 Dec;166(12):1160-1170. doi: 10.1099/mic.0.000991.
Metab Eng. 2014 Jul;24:87-96. doi: 10.1016/j.ymben.2014.05.003. Epub 2014 May 14.
4
Simultaneous saccharification and fermentation of cassava to succinic acid by Escherichia coli NZN111.利用大肠杆菌 NZN111 对木薯进行同步糖化发酵生产丁二酸。
Bioresour Technol. 2014 Jul;163:100-5. doi: 10.1016/j.biortech.2014.04.020. Epub 2014 Apr 18.
5
Activating C4-dicarboxylate transporters DcuB and DcuC for improving succinate production.激活 C4-二羧酸转运蛋白 DcuB 和 DcuC 以提高琥珀酸产量。
Appl Microbiol Biotechnol. 2014 Mar;98(5):2197-205. doi: 10.1007/s00253-013-5387-7. Epub 2013 Dec 10.
6
Activating phosphoenolpyruvate carboxylase and phosphoenolpyruvate carboxykinase in combination for improvement of succinate production.联合激活磷酸烯醇式丙酮酸羧激酶和磷酸烯醇式丙酮酸羧化酶以提高琥珀酸产量。
Appl Environ Microbiol. 2013 Aug;79(16):4838-44. doi: 10.1128/AEM.00826-13. Epub 2013 Jun 7.
7
A comparison of methods for differential expression analysis of RNA-seq data.RNA-seq 数据差异表达分析方法的比较。
BMC Bioinformatics. 2013 Mar 9;14:91. doi: 10.1186/1471-2105-14-91.
8
Crystal structure of a bacterial homologue of glucose transporters GLUT1-4.细菌葡萄糖转运蛋白 GLUT1-4 同源物的晶体结构
Nature. 2012 Oct 18;490(7420):361-6. doi: 10.1038/nature11524.
9
Fast gapped-read alignment with Bowtie 2.快速缺口读对准与 Bowtie 2。
Nat Methods. 2012 Mar 4;9(4):357-9. doi: 10.1038/nmeth.1923.
10
NGS QC Toolkit: a toolkit for quality control of next generation sequencing data.NGS QC 工具包:下一代测序数据质量控制工具包。
PLoS One. 2012;7(2):e30619. doi: 10.1371/journal.pone.0030619. Epub 2012 Feb 1.