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尽管胸苷激酶基因位置不同,但禽痘病毒DNA区域与痘苗病毒HindIII J片段之间存在相似的基因组织。

Similar genetic organization between a region of fowlpox virus DNA and the vaccinia virus HindIII J fragment despite divergent location of the thymidine kinase gene.

作者信息

Drillien R, Spehner D, Villeval D, Lecocq J P

出版信息

Virology. 1987 Sep;160(1):203-9. doi: 10.1016/0042-6822(87)90061-4.

DOI:10.1016/0042-6822(87)90061-4
PMID:2820129
Abstract

DNA from Fowlpox virus, a member of the Avipoxvirus genus, has been found to hybridize to DNA from vaccinia virus, a member of the Orthopoxvirus genus. The greatest homology detected was around the region containing the vaccinia virus thymidine kinase locus. A 3.1-kbp fowlpox virus fragment that hybridizes to the vaccinia virus HindIII J fragment has been cloned and its sequence determined. Comparison of the nucleotide and deduced amino acid sequence to the cross hybridizing vaccinia fragment revealed extensive conservation of six open reading frames as well as a similar organization along the genome. Nevertheless a fowlpox virus gene corresponding to the vaccinia virus thymidine kinase gene was apparently lacking within the region studied and is probably located elsewhere in the genome. Despite this intriguing divergence, our results indicate that the Avipoxviruses are more closely related to the Orthopoxviruses than previously suspected.

摘要

禽痘病毒属的成员禽痘病毒的DNA已被发现与正痘病毒属的成员痘苗病毒的DNA杂交。检测到的最大同源性位于包含痘苗病毒胸苷激酶基因座的区域周围。一个与痘苗病毒HindIII J片段杂交的3.1千碱基对禽痘病毒片段已被克隆并确定了其序列。将该核苷酸和推导的氨基酸序列与交叉杂交的痘苗片段进行比较,发现六个开放阅读框有广泛的保守性,并且沿基因组有相似的组织。然而,在所研究的区域内显然缺乏与痘苗病毒胸苷激酶基因相对应的禽痘病毒基因,该基因可能位于基因组的其他位置。尽管存在这种有趣的差异,但我们的结果表明,禽痘病毒与正痘病毒的关系比以前怀疑的更为密切。

相似文献

1
Similar genetic organization between a region of fowlpox virus DNA and the vaccinia virus HindIII J fragment despite divergent location of the thymidine kinase gene.尽管胸苷激酶基因位置不同,但禽痘病毒DNA区域与痘苗病毒HindIII J片段之间存在相似的基因组织。
Virology. 1987 Sep;160(1):203-9. doi: 10.1016/0042-6822(87)90061-4.
2
Comparison of a conserved region in fowlpox virus and vaccinia virus genomes and the translocation of the fowlpox virus thymidine kinase gene.禽痘病毒和痘苗病毒基因组中保守区域的比较以及禽痘病毒胸苷激酶基因的易位
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Nucleotide sequence analysis of a 10.5 kbp HindIII fragment of fowlpox virus: relatedness to the central portion of the vaccinia virus HindIII D region.禽痘病毒10.5kbp HindIII片段的核苷酸序列分析:与痘苗病毒HindIII D区中央部分的相关性
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Fowlpox virus thymidine kinase: nucleotide sequence and relationships to other thymidine kinases.禽痘病毒胸苷激酶:核苷酸序列及其与其他胸苷激酶的关系。
Virology. 1987 Feb;156(2):355-65. doi: 10.1016/0042-6822(87)90415-6.
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Identification and cloning of the fowlpox virus thymidine kinase gene using vaccinia virus.利用痘苗病毒鉴定和克隆禽痘病毒胸苷激酶基因
J Gen Virol. 1986 Aug;67 ( Pt 8):1591-600. doi: 10.1099/0022-1317-67-8-1591.
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Analysis of the fowlpox virus genome region corresponding to the vaccinia virus D6 to A1 region: location of, and variation in, non-essential genes in poxviruses.禽痘病毒基因组中与痘苗病毒D6至A1区域相对应区域的分析:痘病毒中非必需基因的定位及变异
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Gene translocations in poxviruses: the fowlpox virus thymidine kinase gene is flanked by 15 bp direct repeats and occupies the locus which in vaccinia virus is occupied by the ribonucleotide reductase large subunit gene.痘病毒中的基因易位:禽痘病毒胸苷激酶基因两侧有15个碱基对的正向重复序列,且占据了痘苗病毒中由核糖核苷酸还原酶大亚基基因所占据的位点。
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Identification by a random sequencing strategy of the fowlpoxvirus DNA polymerase gene, its nucleotide sequence and comparison with other viral DNA polymerases.通过随机测序策略鉴定禽痘病毒DNA聚合酶基因、其核苷酸序列并与其他病毒DNA聚合酶进行比较。
Nucleic Acids Res. 1987 Aug 25;15(16):6563-73. doi: 10.1093/nar/15.16.6563.
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Fine structure analysis and nucleotide sequence of the vaccinia virus thymidine kinase gene.痘苗病毒胸苷激酶基因的精细结构分析及核苷酸序列
Proc Natl Acad Sci U S A. 1983 Jun;80(11):3411-5. doi: 10.1073/pnas.80.11.3411.

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