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普通菜豆中与角斑病和白粉病抗性相关的数量性状位点的连锁与定位

Linkage and mapping of quantitative trait loci associated with angular leaf spot and powdery mildew resistance in common beans.

作者信息

Bassi Denis, Briñez Boris, Rosa Juliana Santa, Oblessuc Paula Rodrigues, Almeida Caléo Panhoca de, Nucci Stella Maris, Silva Larissa Chariel Domingos da, Chiorato Alisson Fernando, Vianello Rosana Pereira, Camargo Luis Eduardo Aranha, Blair Matthew Wohlgemuth, Benchimol-Reis Luciana Lasry

机构信息

Centro de Recursos Genéticos Vegetais, Instituto Agronômico de Campinas (IAC), Campinas, SP, Brazil.

Centro de Grãos e Fibras, Instituto Agronômico de Campinas (IAC), Campinas, SP, Brazil.

出版信息

Genet Mol Biol. 2017 Jan-Mar;40(1):109-122. doi: 10.1590/1678-4685-GMB-2015-0314. Epub 2017 Feb 20.

DOI:10.1590/1678-4685-GMB-2015-0314
PMID:28222201
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5409766/
Abstract

Angular leaf spot (ALS) and powdery mildew (PWM) are two important fungi diseases causing significant yield losses in common beans. In this study, a new genetic linkage map was constructed using single sequence repeats (SSRs) and single nucleotide polymorphisms (SNPs), in a segregating population derived from the AND 277 x SEA 5 cross, with 105 recombinant inbred lines. Phenotypic evaluations were performed in the greenhouse to identify quantitative trait loci (QTLs) associated with resistance by means of the composite interval mapping analysis. Four QTLs were identified for ALS resistance. The QTL ALS11AS, linked on the SNP BAR 5054, mapped on chromosome Pv11, showed the greatest effect (R2 = 26.5%) on ALS phenotypic variance. For PWM resistance, two QTLs were detected, PWM2AS and PWM11AS, on Pv2 and Pv11, explaining 7% and 66% of the phenotypic variation, respectively. Both QTLs on Pv11 were mapped on the same genomic region, suggesting that it is a pleiotropic region. The present study resulted in the identification of new markers closely linked to ALS and PWM QTLs, which can be used for marker-assisted selection, fine mapping and positional cloning.

摘要

角斑病（ALS）和白粉病（PWM）是导致普通菜豆严重减产的两种重要真菌病害。在本研究中，利用单序列重复（SSR）和单核苷酸多态性（SNP），在由AND 277×SEA 5杂交产生的、包含105个重组自交系的分离群体中构建了一个新的遗传连锁图谱。在温室中进行表型评估，通过复合区间作图分析来鉴定与抗性相关的数量性状位点（QTL）。鉴定出4个与ALS抗性相关的QTL。与SNP BAR 5054连锁的QTL ALS11AS位于Pv11染色体上，对ALS表型变异的影响最大（R2 = 26.5%）。对于PWM抗性，在Pv2和Pv11上检测到两个QTL，即PWM2AS和PWM11AS，分别解释了7%和66%的表型变异。Pv11上的两个QTL位于同一基因组区域，表明这是一个多效性区域。本研究鉴定出了与ALS和PWM QTL紧密连锁的新标记，可用于标记辅助选择、精细定位和图位克隆。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5ce/5409766/5f62bfc8967c/1415-4757-gmb-1678-4685-GMB-2015-0314-gf02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5ce/5409766/dac3787e6ded/1415-4757-gmb-1678-4685-GMB-2015-0314-gf01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5ce/5409766/5f62bfc8967c/1415-4757-gmb-1678-4685-GMB-2015-0314-gf02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5ce/5409766/dac3787e6ded/1415-4757-gmb-1678-4685-GMB-2015-0314-gf01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a5ce/5409766/5f62bfc8967c/1415-4757-gmb-1678-4685-GMB-2015-0314-gf02.jpg

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