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在机械网络中设计受变构启发的响应。

Designing allostery-inspired response in mechanical networks.

作者信息

Rocks Jason W, Pashine Nidhi, Bischofberger Irmgard, Goodrich Carl P, Liu Andrea J, Nagel Sidney R

机构信息

Department of Physics and Astronomy, University of Pennsylvania, Philadelphia, PA 19104.

Department of Physics, University of Chicago, Chicago, IL 60637.

出版信息

Proc Natl Acad Sci U S A. 2017 Mar 7;114(10):2520-2525. doi: 10.1073/pnas.1612139114. Epub 2017 Feb 21.

Abstract

Recent advances in designing metamaterials have demonstrated that global mechanical properties of disordered spring networks can be tuned by selectively modifying only a small subset of bonds. Here, using a computationally efficient approach, we extend this idea to tune more general properties of networks. With nearly complete success, we are able to produce a strain between any two target nodes in a network in response to an applied source strain on any other pair of nodes by removing only ∼1% of the bonds. We are also able to control multiple pairs of target nodes, each with a different individual response, from a single source, and to tune multiple independent source/target responses simultaneously into a network. We have fabricated physical networks in macroscopic 2D and 3D systems that exhibit these responses. This work is inspired by the long-range coupled conformational changes that constitute allosteric function in proteins. The fact that allostery is a common means for regulation in biological molecules suggests that it is a relatively easy property to develop through evolution. In analogy, our results show that long-range coupled mechanical responses are similarly easy to achieve in disordered networks.

摘要

超材料设计方面的最新进展表明,无序弹簧网络的整体力学性能可以通过仅选择性地修改一小部分键来进行调节。在此,我们采用一种计算效率高的方法,将这一理念扩展到调节网络的更一般属性。几乎完全成功地,我们能够通过仅去除约1%的键,在网络中任意一对源节点上施加应变时,在任意两个目标节点之间产生应变。我们还能够从单个源控制多对目标节点,每对节点具有不同的个体响应,并将多个独立的源/目标响应同时调节到一个网络中。我们已经在宏观二维和三维系统中制造出了展现这些响应的物理网络。这项工作的灵感来源于构成蛋白质变构功能的远程耦合构象变化。变构是生物分子中一种常见调节方式这一事实表明,它是一种相对容易通过进化发展出来的特性。类似地,我们的结果表明,远程耦合力学响应在无序网络中同样容易实现。

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本文引用的文献

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Architecture and coevolution of allosteric materials.变构材料的结构与协同进化
Proc Natl Acad Sci U S A. 2017 Mar 7;114(10):2526-2531. doi: 10.1073/pnas.1615536114. Epub 2017 Feb 21.
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The role of rigidity in controlling material failure.刚度在控制材料失效中的作用。
Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):10813-7. doi: 10.1073/pnas.1501169113. Epub 2016 Sep 12.
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Spatial structure of states of self stress in jammed systems.自应力状态的空间结构在被堵塞的系统中。
Soft Matter. 2016 May 7;12(17):3982-90. doi: 10.1039/c6sm00094k. Epub 2016 Mar 21.
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Controlling Allosteric Networks in Proteins.控制蛋白质中的变构网络。
Chem Rev. 2016 Jun 8;116(11):6463-87. doi: 10.1021/acs.chemrev.5b00544. Epub 2016 Feb 19.
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A Chemical Perspective on Allostery.变构作用的化学视角。
Chem Rev. 2016 Jun 8;116(11):6488-502. doi: 10.1021/acs.chemrev.5b00543. Epub 2016 Jan 7.
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Allosteric sites: remote control in regulation of protein activity.变构位点:蛋白质活性调节中的远程控制
Curr Opin Struct Biol. 2016 Apr;37:1-8. doi: 10.1016/j.sbi.2015.10.004. Epub 2015 Nov 10.
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Rigidity loss in disordered systems: three scenarios.无序系统中的刚性丧失:三种情形。
Phys Rev Lett. 2015 Apr 3;114(13):135501. doi: 10.1103/PhysRevLett.114.135501. Epub 2015 Apr 1.

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