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酶调控中的构象异质性与内在无序性:以葡萄糖激酶为例的研究

Conformational heterogeneity and intrinsic disorder in enzyme regulation: Glucokinase as a case study.

作者信息

Larion Mioara, Miller Brian, Brüschweiler Rafael

机构信息

Department of Chemistry and Biochemistry; The Ohio State University ; Columbus, OH USA.

Department of Chemistry and Biochemistry; Florida State University ; Tallahassee, FL USA.

出版信息

Intrinsically Disord Proteins. 2015 Apr 22;3(1):e1011008. doi: 10.1080/21690707.2015.1011008. eCollection 2015.

Abstract

Many human proteins are predicted to contain intrinsically disordered regions (IDRs), yet their occurrence in enzymes is notably rare. Human pancreatic glucokinase (GCK) is one of a small, but growing number of enzymes shown to possess an IDR. In this commentary, we summarize the results of recent biophysical studies that provide evidence for a functionally significant disorder-order transition within the IDR of GCK during the enzyme's catalytic cycle. High-resolution NMR studies indicate that kinetic cooperativity in GCK results from glucose-mediated millisecond conformational dynamics within the structurally heterogeneous and partially disordered small domain of this monomeric enzyme, whereby the precise timescale of these motions is critical for the manifestation of the kinetic cooperativity effect. GCK provides an excellent case study for understanding how structural and dynamic alterations within an IDR enable novel regulatory mechanisms. These studies also establish GCK as a model system for investigating the functional consequences of disorder and conformational heterogeneity in enzymatic systems in general.

摘要

许多人类蛋白质被预测含有内在无序区域(IDR),然而它们在酶中的出现却极为罕见。人类胰腺葡萄糖激酶(GCK)是已被证明拥有IDR的少数但数量不断增加的酶之一。在本评论中,我们总结了最近的生物物理研究结果,这些结果为GCK的IDR在酶的催化循环中发生功能上重要的无序-有序转变提供了证据。高分辨率核磁共振研究表明,GCK中的动力学协同性源于葡萄糖介导的毫秒级构象动力学,这种动力学发生在这种单体酶结构异质且部分无序的小结构域内,其中这些运动的精确时间尺度对于动力学协同效应的表现至关重要。GCK为理解IDR内的结构和动态变化如何实现新的调节机制提供了一个绝佳的案例研究。这些研究还将GCK确立为一个模型系统,用于总体研究酶系统中无序和构象异质性的功能后果。

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本文引用的文献

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Classification of intrinsically disordered regions and proteins.内在无序区域和蛋白质的分类
Chem Rev. 2014 Jul 9;114(13):6589-631. doi: 10.1021/cr400525m. Epub 2014 Apr 29.
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The ensemble nature of allostery.变构的整体性。
Nature. 2014 Apr 17;508(7496):331-9. doi: 10.1038/nature13001.
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Biochemistry. 2013 Apr 30;52(17):2949-54. doi: 10.1021/bi4001744. Epub 2013 Apr 18.
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D²P²: database of disordered protein predictions.D²P²:紊乱蛋白预测数据库。
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Homotropic allosteric regulation in monomeric mammalian glucokinase.单体哺乳动物葡萄糖激酶的同变变构调节。
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