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沿海海洋环境中微生物的甲基胺作为氮源。

Methylamine as a nitrogen source for microorganisms from a coastal marine environment.

机构信息

Aquatic Geomicrobiology, Institute of Ecology, Friedrich Schiller University Jena, Dornburger Str. 159, Jena, 07743, Germany.

School of Environmental Sciences, University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.

出版信息

Environ Microbiol. 2017 Jun;19(6):2246-2257. doi: 10.1111/1462-2920.13709. Epub 2017 Mar 29.

Abstract

Nitrogen is a key limiting resource for biomass production in the marine environment. Methylated amines, released from the degradation of osmolytes, could provide a nitrogen source for marine microbes. Thus far, studies in aquatic habitats on the utilization of methylamine, the simplest methylated amine, have mainly focussed on the fate of the carbon from this compound. Various groups of methylotrophs, microorganisms that can grow on one-carbon compounds, use methylamine as a carbon source. Non-methylotrophic microorganisms may also utilize methylamine as a nitrogen source, but little is known about their diversity, especially in the marine environment. In this proof-of-concept study, stable isotope probing (SIP) was used to identify microorganisms from a coastal environment that assimilate nitrogen from methylamine. SIP experiments using N methylamine combined with metagenomics and metaproteomics facilitated identification of active methylamine-utilizing Alpha- and Gammaproteobacteria. The draft genomes of two methylamine utilizers were obtained and their metabolism with respect to methylamine was examined. Both bacteria identified in these SIP experiments used the γ-glutamyl-methylamide pathway, found in both methylotrophs and non-methylotrophs, to metabolize methylamine. The utilization of N methylamine also led to the release of N ammonium that was used as nitrogen source by other microorganisms not directly using methylamine.

摘要

氮是海洋环境中生物量生产的关键限制资源。从渗透物降解中释放的甲基胺可以为海洋微生物提供氮源。到目前为止,水生栖息地对最简单的甲基胺——甲胺的利用研究主要集中在这种化合物碳的命运上。能够利用一碳化合物的甲基营养菌的各种群体将甲胺用作碳源。非甲基营养微生物也可能将甲胺用作氮源,但对它们的多样性知之甚少,尤其是在海洋环境中。在这项概念验证研究中,稳定同位素探测 (SIP) 用于鉴定沿海环境中从甲胺中同化氮的微生物。使用 15 N 甲胺结合宏基因组学和宏蛋白质组学进行的 SIP 实验促进了活性甲胺利用的 Alpha-和 Gammaproteobacteria 的鉴定。获得了两种甲胺利用者的草案基因组,并检查了它们对甲胺的代谢。在这些 SIP 实验中鉴定的两种细菌都使用了γ-谷氨酰甲基酰胺途径,该途径存在于甲基营养菌和非甲基营养菌中,用于代谢甲胺。N 甲基胺的利用还导致了 N 铵的释放,其他不直接使用甲胺的微生物将 N 铵用作氮源。

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