• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在上海光源(SSRF)的专用小角X射线散射(SAXS)光束线BL16B1上进行绝对散射强度校准和蛋白质分子量测定的性能。

Performance on absolute scattering intensity calibration and protein molecular weight determination at BL16B1, a dedicated SAXS beamline at SSRF.

作者信息

Zeng Jianrong, Bian Fenggang, Wang Jie, Li Xiuhong, Wang Yuzhu, Tian Feng, Zhou Ping

机构信息

Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Zhangheng Road 239, Pudong District, Shanghai 201204, People's Republic of China.

出版信息

J Synchrotron Radiat. 2017 Mar 1;24(Pt 2):509-520. doi: 10.1107/S1600577516019135. Epub 2017 Jan 24.

DOI:10.1107/S1600577516019135
PMID:28244448
Abstract

The optical system and end-station of bending-magnet beamline BL16B1, dedicated to small-angle X-ray scattering (SAXS) at the Shanghai Synchrotron Radiation Facility, is described. Constructed in 2009 and upgraded in 2013, this beamline has been open to users since May 2009 and supports methodologies including SAXS, wide-angle X-ray scattering (WAXS), simultaneous SAXS/WAXS, grazing-incidence small-angle X-ray scattering (GISAXS) and anomalous small-angle X-ray scattering (ASAXS). Considering that an increasing necessity for absolute calibration of SAXS intensity has been recognized in in-depth investigations, SAXS intensity is re-stated according to the extent of data processing, and the absolute intensity is suggested to be a unified presentation of SAXS data in this article. Theory with a practical procedure for absolute intensity calibration is established based on BL16B1, using glass carbon and water as primary and secondary standards, respectively. The calibration procedure can be completed in minutes and shows good reliability under different conditions. An empirical line of scale factor estimation is also established for any specific SAXS setup at the beamline. Beamline performance on molecular weight (MW) determination is provided as a straightforward application and verification of the absolute intensity calibration. Results show good accuracy with a deviation of less than 10% compared with the known value, which is also the best attainable accuracy in recent studies using SAXS to measure protein MW. Fast MW measurement following the demonstrated method also enables an instant check or pre-diagnosis of the SAXS performance to improve the data acquisition.

摘要

本文介绍了上海同步辐射装置上专门用于小角X射线散射(SAXS)的弯铁光束线BL16B1的光学系统和终端站。该光束线于2009年建成并于2013年升级,自2009年5月起对用户开放,支持包括SAXS、广角X射线散射(WAXS)、同步SAXS/WAXS、掠入射小角X射线散射(GISAXS)和反常小角X射线散射(ASAXS)等方法。考虑到在深入研究中已认识到对SAXS强度进行绝对校准的必要性日益增加,本文根据数据处理程度重新阐述了SAXS强度,并建议绝对强度作为SAXS数据的统一呈现方式。基于BL16B1,分别以玻璃碳和水作为一级和二级标准,建立了绝对强度校准的理论及实际程序。校准程序可在数分钟内完成,且在不同条件下具有良好的可靠性。还为光束线上的任何特定SAXS装置建立了比例因子估计的经验线。作为绝对强度校准的直接应用和验证,给出了光束线在分子量(MW)测定方面的性能。结果显示出良好的准确性,与已知值相比偏差小于10%,这也是近期使用SAXS测量蛋白质MW的研究中可达到的最佳准确性。按照所展示的方法进行快速MW测量还能够即时检查或预诊断SAXS性能,以改善数据采集。

相似文献

1
Performance on absolute scattering intensity calibration and protein molecular weight determination at BL16B1, a dedicated SAXS beamline at SSRF.在上海光源(SSRF)的专用小角X射线散射(SAXS)光束线BL16B1上进行绝对散射强度校准和蛋白质分子量测定的性能。
J Synchrotron Radiat. 2017 Mar 1;24(Pt 2):509-520. doi: 10.1107/S1600577516019135. Epub 2017 Jan 24.
2
The new small-angle X-ray scattering beamline for materials research at PETRA III: SAXSMAT beamline P62.用于PETRA III材料研究的新型小角X射线散射光束线:SAXSMAT光束线P62。
J Synchrotron Radiat. 2023 Nov 1;30(Pt 6):1156-1167. doi: 10.1107/S1600577523008603. Epub 2023 Oct 20.
3
Using an in-vacuum CCD detector for simultaneous small- and wide-angle scattering at beamline X9.使用真空 CCD 探测器在 X9 光束线上实现小角和广角散射的同时测量。
J Synchrotron Radiat. 2013 Mar;20(Pt 2):211-8. doi: 10.1107/S0909049512048984. Epub 2013 Jan 19.
4
The beamlines of ELETTRA and their application to structural biology.埃莱特拉(ELETTRA)的光束线及其在结构生物学中的应用。
Genetica. 1999;106(1-2):171-80. doi: 10.1023/a:1003757718266.
5
Strategies for data collection and calibration with a pinhole-geometry SAXS instrument on a synchrotron beamline.在同步加速器光束线上使用针孔几何小角X射线散射(SAXS)仪器进行数据收集和校准的策略。
J Synchrotron Radiat. 2006 Nov;13(Pt 6):440-4. doi: 10.1107/S0909049506030184. Epub 2006 Oct 18.
6
Determination of protein oligomeric structure from small-angle X-ray scattering.从小角度 X 射线散射确定蛋白质的寡聚结构。
Protein Sci. 2018 Apr;27(4):814-824. doi: 10.1002/pro.3376. Epub 2018 Feb 10.
7
Performance of small- and wide-angle x-ray scattering beamline at Indus-2 synchrotron.印杜斯-2同步加速器小角度和广角X射线散射光束线的性能
Rev Sci Instrum. 2023 Apr 1;94(4). doi: 10.1063/5.0121310.
8
Anomalous SAXS at P12 beamline EMBL Hamburg: instrumentation and applications.SAXS 异常:汉堡 EMBL 光束线 P12 的仪器和应用。
J Synchrotron Radiat. 2021 May 1;28(Pt 3):812-823. doi: 10.1107/S1600577521003404. Epub 2021 Apr 14.
9
Biomolecular solution X-ray scattering at the National Synchrotron Light Source.在国家同步辐射光源下进行生物分子溶液 X 射线散射研究。
J Synchrotron Radiat. 2011 Jan;18(1):41-4. doi: 10.1107/S0909049510036022. Epub 2010 Nov 5.
10
NIST Standard Reference Material 3600: Absolute Intensity Calibration Standard for Small-Angle X-ray Scattering.美国国家标准与技术研究院标准参考物质3600:小角X射线散射绝对强度校准标准
J Appl Crystallogr. 2017 Mar 7;50(Pt 2):462-474. doi: 10.1107/S1600576717001972. eCollection 2017 Apr 1.

引用本文的文献

1
Elucidation of the Sodium-Ion Storage Behaviors in Hard Carbon Anodes through Pore Architecture Engineering.通过孔隙结构工程阐明硬碳负极中的钠离子存储行为
ACS Nano. 2025 Jun 24;19(24):22201-22216. doi: 10.1021/acsnano.5c03700. Epub 2025 Jun 9.
2
Revealing Two Distinct Formation Pathways of 2D Wurtzite-CdSe Nanocrystals Using In Situ X-Ray Scattering.利用原位X射线散射揭示二维纤锌矿型CdSe纳米晶体的两种不同形成途径
Adv Sci (Weinh). 2024 Feb;11(6):e2307600. doi: 10.1002/advs.202307600. Epub 2023 Dec 10.
3
Short-Distance Intermolecular Correlations of Mono- and Disaccharides in Condensed Solutions: Bulky Character of Trehalose.
凝聚态溶液中单糖和二糖的短程分子间相关性:海藻糖的庞大特性
ACS Omega. 2020 May 5;5(19):10815-10825. doi: 10.1021/acsomega.0c00451. eCollection 2020 May 19.
4
Evolving SAXS versatility: solution X-ray scattering for macromolecular architecture, functional landscapes, and integrative structural biology.不断发展的小角 X 射线散射技术的多功能性:用于大分子结构、功能景观和综合结构生物学的溶液 X 射线散射技术。
Curr Opin Struct Biol. 2019 Oct;58:197-213. doi: 10.1016/j.sbi.2019.04.004. Epub 2019 Jun 13.
5
Exploring nanoscale structure change of dermal tissues suffering injury by small angle X-ray scattering and transmission electron microscopy.通过小角X射线散射和透射电子显微镜探索受伤皮肤组织的纳米级结构变化。
Mol Biol Rep. 2019 Feb;46(1):67-76. doi: 10.1007/s11033-018-4444-9. Epub 2018 Oct 29.
6
SAXSMoW 2.0: Online calculator of the molecular weight of proteins in dilute solution from experimental SAXS data measured on a relative scale.SAXSMoW 2.0:一种在线计算器,可根据在相对标度上测量的实验 SAXS 数据计算稀溶液中蛋白质的分子量。
Protein Sci. 2019 Feb;28(2):454-463. doi: 10.1002/pro.3528. Epub 2018 Dec 13.