Hay Etay, Ritter Petra, Lobaugh Nancy J, McIntosh Anthony R
Rotman Research Institute, Baycrest Centre, Toronto, Ontario, Canada.
Department of Neurology, Charité-University Medicine, Berlin, Germany.
PLoS Comput Biol. 2017 Mar 1;13(3):e1005410. doi: 10.1371/journal.pcbi.1005410. eCollection 2017 Mar.
Data-driven models of functional magnetic resonance imaging (fMRI) activity can elucidate dependencies that involve the combination of multiple brain regions. Activity in some regions during resting-state fMRI can be predicted with high accuracy from the activities of other regions. However, it remains unclear in which regions activity depends on unique integration of multiple predictor regions. To address this question, sparse (parsimonious) models could serve to better determine key interregional dependencies by reducing false positives. We used resting-state fMRI data from 46 subjects, and for each region of interest (ROI) per subject we performed whole-brain recursive feature elimination (RFE) to select the minimal set of ROIs that best predicted activity in the modeled ROI. We quantified the dependence of activity on multiple predictor ROIs, by measuring the gain in prediction accuracy of models that incorporated multiple predictor ROIs compared to models that used a single predictor ROI. We identified regions that showed considerable evidence of multiregional integration and determined the key regions that contributed to their observed activity. Our models reveal fronto-parietal integration networks, little integration in primary sensory regions, as well as redundancy between some regions. Our study demonstrates the utility of whole-brain RFE to generate data-driven models with minimal sets of ROIs that predict activity with high accuracy. By determining the extent to which activity in each ROI depended on integration of signals from multiple ROIs, we find cortical integration networks during resting-state activity.
功能磁共振成像(fMRI)活动的数据驱动模型可以阐明涉及多个脑区组合的依赖性。静息态fMRI期间某些区域的活动可以根据其他区域的活动以高精度进行预测。然而,尚不清楚哪些区域的活动依赖于多个预测区域的独特整合。为了解决这个问题,稀疏(简约)模型可以通过减少假阳性来更好地确定关键的区域间依赖性。我们使用了46名受试者的静息态fMRI数据,并且对于每个受试者的每个感兴趣区域(ROI),我们进行了全脑递归特征消除(RFE),以选择能够最佳预测建模ROI中活动的最小ROI集。我们通过测量纳入多个预测ROI的模型与使用单个预测ROI的模型相比在预测准确性上的增益,来量化活动对多个预测ROI的依赖性。我们确定了显示出多区域整合大量证据的区域,并确定了对其观察到的活动有贡献的关键区域。我们的模型揭示了额顶叶整合网络、初级感觉区域几乎没有整合以及一些区域之间的冗余。我们的研究证明了全脑RFE在生成具有最小ROI集的数据驱动模型方面的效用,这些模型能够高精度地预测活动。通过确定每个ROI中的活动在多大程度上依赖于来自多个ROI的信号整合,我们发现了静息态活动期间的皮质整合网络。