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基于分子标记的巴西药用植物海巴戟(诺丽)研究较少的种质资源的遗传多样性分析

Molecular marker-based genetic diversity analysis of scantly studied Brazilian accessions of a medicinal plant, Morinda citrifolia L. (noni).

作者信息

Bordallo P N, Monteiro A M R, Sousa J A, Aragão F A S

机构信息

Embrapa Agroindústria Tropical, Fortaleza, CE, Brasil

Embrapa Agroindústria Tropical, Fortaleza, CE, Brasil.

出版信息

Genet Mol Res. 2017 Feb 23;16(1):gmr-16-01-gmr.16019531. doi: 10.4238/gmr16019531.

Abstract

Morinda citrifolia L., commonly known as noni, has been used for the treatment of various diseases for over two centuries. It was introduced and widely disseminated in Brazil because of its high market value and ease of adaptation to the soil and climatic conditions of the country. The aim of this study was to estimate the genetic variability of noni accessions from the collection of Embrapa Agroindústria Tropical in Brazil. We evaluated 36 plants of the 13 accessions of noni from the germplasm collection of M. citrifolia. Several methods of DNA extraction were tested. After definition of the method, the DNA of each sample was subjected to polymerase chain reactions using 20 random amplified polymorphic DNA primers. The band patterns on agarose gel were converted into a binary data matrix, which was used to estimate the genetic distances between the plants and to perform the cluster analyses. Of the total number of markers used in this study, 125 (81.1%) were polymorphic. The genetic distances between the genotypes ranged from 0.04 to 0.49. Regardless of the high number of polymorphic bands, the genetic variability of the noni plants evaluated was low since most of the genotypes belonged to the same cluster as shown by the dendrogram and Tocher's cluster analysis. The low genetic diversity among the studied noni individuals indicates that additional variability should be introduced in the germplasm collection of noni by gathering new individuals and/or by hybridizing contrasting individuals.

摘要

海巴戟,俗称诺丽果,两个多世纪以来一直被用于治疗各种疾病。由于其高市场价值以及易于适应巴西的土壤和气候条件,它被引入并在巴西广泛传播。本研究的目的是评估巴西热带农业研究公司(Embrapa)收集的诺丽果种质的遗传变异性。我们对来自海巴戟种质库的13个诺丽果种质的36株植株进行了评估。测试了几种DNA提取方法。确定方法后,使用20个随机扩增多态性DNA引物对每个样本的DNA进行聚合酶链反应。琼脂糖凝胶上的条带模式被转换为二元数据矩阵,用于估计植株之间的遗传距离并进行聚类分析。在本研究使用的标记总数中,125个(81.1%)是多态性的。基因型之间的遗传距离在0.04至0.49之间。尽管有多态性条带数量较多,但如聚类图和托赫尔聚类分析所示,由于大多数基因型属于同一聚类,因此所评估的诺丽果植株的遗传变异性较低。所研究的诺丽果个体之间的低遗传多样性表明,应通过收集新个体和/或使对比个体杂交,在诺丽果种质库中引入额外的变异性。

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