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基于通量平衡分析对聚球藻属PCC 6803进行代谢工程改造以提高乙醇产量

Metabolic engineering of Synechocystis sp. PCC 6803 for enhanced ethanol production based on flux balance analysis.

作者信息

Yoshikawa Katsunori, Toya Yoshihiro, Shimizu Hiroshi

机构信息

Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, Japan.

出版信息

Bioprocess Biosyst Eng. 2017 May;40(5):791-796. doi: 10.1007/s00449-017-1744-8. Epub 2017 Mar 3.

Abstract

Synechocystis sp. PCC 6803 is an attractive host for bio-ethanol production due to its ability to directly convert atmospheric carbon dioxide into ethanol using photosystems. To enhance ethanol production in Synechocystis sp. PCC 6803, metabolic engineering was performed based on in silico simulations, using the genome-scale metabolic model. Comprehensive reaction knockout simulations by flux balance analysis predicted that the knockout of NAD(P)H dehydrogenase enhanced ethanol production under photoautotrophic conditions, where ammonium is the nitrogen source. This deletion inhibits the re-oxidation of NAD(P)H, which is generated by ferredoxin-NADP reductase and imposes re-oxidation in the ethanol synthesis pathway. The effect of deleting the ndhF1 gene, which encodes NADH dehydrogenase subunit 5, on ethanol production was experimentally evaluated using ethanol-producing strains of Synechocystis sp. PCC 6803. The ethanol titer of the ethanol-producing ∆ndhF1 strain increased by 145%, compared with that of the control strain.

摘要

聚球藻属PCC 6803菌株是生物乙醇生产的理想宿主,因为它能够利用光系统将大气中的二氧化碳直接转化为乙醇。为了提高聚球藻属PCC 6803菌株的乙醇产量,基于计算机模拟,利用基因组规模代谢模型进行了代谢工程改造。通过通量平衡分析进行的综合反应敲除模拟预测,在以铵为氮源的光合自养条件下,敲除NAD(P)H脱氢酶可提高乙醇产量。这种缺失抑制了由铁氧化还原蛋白-NADP还原酶产生的NAD(P)H的再氧化,并在乙醇合成途径中强制进行再氧化。使用聚球藻属PCC 6803菌株的乙醇生产菌株,通过实验评估了编码NADH脱氢酶亚基5的ndhF1基因缺失对乙醇生产的影响。与对照菌株相比,产乙醇的∆ndhF1菌株的乙醇滴度提高了145%。

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