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本文引用的文献

1
The Pseudomonas aeruginosa PAO1 Two-Component Regulator CarSR Regulates Calcium Homeostasis and Calcium-Induced Virulence Factor Production through Its Regulatory Targets CarO and CarP.铜绿假单胞菌PAO1双组分调节因子CarSR通过其调节靶点CarO和CarP调节钙稳态及钙诱导的毒力因子产生。
J Bacteriol. 2016 Jan 11;198(6):951-63. doi: 10.1128/JB.00963-15.
2
Ribosome hibernation facilitates tolerance of stationary-phase bacteria to aminoglycosides.核糖体休眠促进了稳定期细菌对氨基糖苷类药物的耐受性。
Antimicrob Agents Chemother. 2015 Nov;59(11):6992-9. doi: 10.1128/AAC.01532-15. Epub 2015 Aug 31.
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Recent functional insights into the role of (p)ppGpp in bacterial physiology.近期对(p)ppGpp在细菌生理学中作用的功能见解。
Nat Rev Microbiol. 2015 May;13(5):298-309. doi: 10.1038/nrmicro3448. Epub 2015 Apr 8.
4
The VrrA sRNA controls a stationary phase survival factor Vrp of Vibrio cholerae.VrrA小RNA控制霍乱弧菌的一个稳定期存活因子Vrp。
RNA Biol. 2015;12(2):186-96. doi: 10.1080/15476286.2015.1017211.
5
The Listeria monocytogenes hibernation-promoting factor is required for the formation of 100S ribosomes, optimal fitness, and pathogenesis.单核细胞增生李斯特菌的促休眠因子对于100S核糖体的形成、最佳适应性和致病性是必需的。
J Bacteriol. 2015 Feb;197(3):581-91. doi: 10.1128/JB.02223-14. Epub 2014 Nov 24.
6
3D-fluorescence in situ hybridization of intact, anaerobic biofilm.完整厌氧生物膜的三维荧光原位杂交
Methods Mol Biol. 2014;1151:189-97. doi: 10.1007/978-1-4939-0554-6_13.
7
Promoter activity dynamics in the lag phase of Escherichia coli.大肠杆菌延滞期的启动子活性动态
BMC Syst Biol. 2013 Dec 30;7:136. doi: 10.1186/1752-0509-7-136.
8
How hibernation factors RMF, HPF, and YfiA turn off protein synthesis.冬眠因子 RMF、HPF 和 YfiA 如何关闭蛋白质合成。
Science. 2012 May 18;336(6083):915-8. doi: 10.1126/science.1218538.
9
The dormancy regulator DosR controls ribosome stability in hypoxic mycobacteria.休眠调控因子 DosR 控制低氧分枝杆菌中核糖体的稳定性。
J Biol Chem. 2012 Jul 6;287(28):24053-63. doi: 10.1074/jbc.M112.364851. Epub 2012 Apr 27.
10
Heterogeneity in Pseudomonas aeruginosa biofilms includes expression of ribosome hibernation factors in the antibiotic-tolerant subpopulation and hypoxia-induced stress response in the metabolically active population.铜绿假单胞菌生物膜的异质性包括核糖体休眠因子在抗生素耐受亚群中的表达和代谢活跃群体中的低氧应激反应。
J Bacteriol. 2012 Apr;194(8):2062-73. doi: 10.1128/JB.00022-12. Epub 2012 Feb 17.

从休眠状态复苏需要冬眠促进因子(PA4463)来保存核糖体。

Resuscitation of from dormancy requires hibernation promoting factor (PA4463) for ribosome preservation.

作者信息

Akiyama Tatsuya, Williamson Kerry S, Schaefer Robert, Pratt Shawna, Chang Connie B, Franklin Michael J

机构信息

Department of Microbiology and Immunology, Montana State University, Bozeman, MT 59717.

Center for Biofilm Engineering, Montana State University, Bozeman, MT 59717.

出版信息

Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):3204-3209. doi: 10.1073/pnas.1700695114. Epub 2017 Mar 7.

DOI:10.1073/pnas.1700695114
PMID:28270601
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5373351/
Abstract

biofilm infections are difficult to treat with antibiotic therapy in part because the biofilms contain subpopulations of dormant antibiotic-tolerant cells. The dormant cells can repopulate the biofilms following alleviation of antibiotic treatments. While dormant, the bacteria must maintain cellular integrity, including ribosome abundance, to reinitiate the de novo protein synthesis required for resuscitation. Here, we demonstrate that the gene PA4463 [hibernation promoting factor (HPF)], but not the ribosome modulation factor (PA3049), is required for ribosomal RNA preservation during prolonged nutrient starvation conditions. Single-cell-level studies using fluorescence in situ hybridization (FISH) and growth in microfluidic drops demonstrate that, in the absence of , the rRNA abundances of starved cells decrease to levels that cause them to lose their ability to resuscitate from starvation, leaving intact nondividing cells. defective in the stringent response also had reduced ability to resuscitate from dormancy. However, FISH analysis of the starved stringent response mutant showed a bimodal response where the individual cells contained either abundant or low ribosome content, compared with the wild-type strain. The results indicate that ribosome maintenance is key for maintaining the ability of to resuscitate from starvation-induced dormancy and that HPF is the major factor associated with ribosome preservation.

摘要

生物膜感染难以用抗生素治疗,部分原因是生物膜中含有休眠的耐抗生素细胞亚群。在抗生素治疗缓解后,这些休眠细胞可以重新填充生物膜。在休眠期间,细菌必须维持细胞完整性,包括核糖体丰度,以便重新启动复苏所需的从头蛋白质合成。在这里,我们证明,在长期营养饥饿条件下,基因PA4463[促进休眠因子(HPF)]而非核糖体调节因子(PA3049)是核糖体RNA保存所必需的。使用荧光原位杂交(FISH)的单细胞水平研究以及在微流控液滴中的生长表明,在缺乏该基因的情况下,饥饿细胞的rRNA丰度会降低到使其失去从饥饿中复苏能力的水平,留下完整的非分裂细胞。在严格反应中存在缺陷的细胞从休眠中复苏的能力也降低。然而,对饥饿的严格反应突变体的FISH分析显示出双峰反应,与野生型菌株相比,单个细胞的核糖体含量要么丰富要么很低。结果表明,核糖体维持是维持细菌从饥饿诱导的休眠中复苏能力的关键,并且HPF是与细菌核糖体保存相关的主要因素。