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一种用于特异性检测羊种布鲁氏菌的新型实时荧光定量PCR检测方法。

A novel real-time PCR assay for specific detection of Brucella melitensis.

作者信息

Kaden Rene, Ferrari Sevinc, Alm Erik, Wahab Tara

机构信息

Department of Medical Sciences, Clinical Microbiology, Uppsala University, Uppsala, Sweden.

National Veterinary Institute, Uppsala, Sweden.

出版信息

BMC Infect Dis. 2017 Mar 24;17(1):230. doi: 10.1186/s12879-017-2327-7.

Abstract

BACKGROUND

Brucellosis is a zoonosis that occurs worldwide. The disease has been completely eradicated in livestock in Sweden in 1994, and all cases of confirmed human brucellosis are imported into Sweden from other countries. However, due to an increase in the number of refugees and asylum seekers from the middle-east to Sweden, there is a need to improve the current diagnostic methodology for Brucella melitensis. Whilst culture of Brucella species can be used as a diagnostic tool, real-time PCR approaches provide a much faster result. The aim of this study was to set up a species-specific real-time PCR for the detection of all biovars of Brucella melitensis, which could be used routinely in diagnostic laboratories.

METHODS

A Brucella melitensis real-time PCR assay was designed using all available genomes in the public database of Brucella (N = 96) including all complete genomes of Brucella melitensis (N = 17). The assay was validated with a collection of 37 Brucella species reference strains, 120 Brucella melitensis human clinical isolates, and 45 clinically relevant non-Brucella melitensis strains.

RESULTS

In this study we developed a single real-time PCR for the specific detection of all biovars of Brucella melitensis.

CONCLUSIONS

This new real-time PCR method shows a high specificity (100%) and a high sensitivity (1.25 GE/μl) and has been implemented in the laboratories of four governmental authorities across Sweden.

摘要

背景

布鲁氏菌病是一种在全球范围内发生的人畜共患病。1994年瑞典已在牲畜中彻底根除了该疾病,所有确诊的人类布鲁氏菌病病例均从其他国家输入瑞典。然而,由于从中东前往瑞典的难民和寻求庇护者数量增加,需要改进当前用于检测羊种布鲁氏菌的诊断方法。虽然布鲁氏菌属的培养可作为一种诊断工具,但实时荧光定量PCR方法能提供更快的结果。本研究的目的是建立一种针对羊种布鲁氏菌所有生物变种检测的种特异性实时荧光定量PCR方法,该方法可在诊断实验室常规使用。

方法

利用布鲁氏菌公共数据库中所有可用的基因组(N = 96)设计了一种羊种布鲁氏菌实时荧光定量PCR检测方法,其中包括所有羊种布鲁氏菌的完整基因组(N = 17)。该检测方法用37株布鲁氏菌属参考菌株、120株羊种布鲁氏菌人类临床分离株和45株临床相关的非羊种布鲁氏菌菌株进行了验证。

结果

在本研究中,我们开发了一种用于特异性检测羊种布鲁氏菌所有生物变种的单一实时荧光定量PCR方法。

结论

这种新的实时荧光定量PCR方法显示出高特异性(100%)和高灵敏度(1.25 GE/μl),并且已在瑞典四个政府部门的实验室中实施。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8e2/5366107/5c80619fd7c9/12879_2017_2327_Fig1_HTML.jpg

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