Narzi Daniele, Mattioli Giuseppe, Bovi Daniele, Guidoni Leonardo
Institute of Chemical Sciences and Engineering, École polytechnique fédérale de Lausanne, Av. F.-A. Forel 2, 1015, Lausanne, Switzerland.
<Istituto di Struttura della Materia del Consiglio Nazionale delle Ricerche, Via Salaria, Km. 29.300, 00016, Monterotondo (RM), Italy.
Chemistry. 2017 May 23;23(29):6969-6973. doi: 10.1002/chem.201700722. Epub 2017 Apr 25.
The Mn CaO cluster of photosystem II promotes a crucial step in the oxygenic photosynthesis, namely, the water-splitting reaction. The structure of such cluster in the S state of the Kok-Joliot's cycle has been recently resolved by femtosecond X-ray free-electron laser (XFEL) measurements. However, the XFEL results are characterized by appreciable discrepancies with previous X-ray diffraction (XRD), as well as with S models based on ab initio calculations. We provide here a unifying picture based on a combined set of DFT-based structures and molecular dynamics simulations of the S and S states. Our findings indicate that the XFEL results cannot be interpreted on the grounds of a single structure. A combination of two S stable isomers together with a minority contribution of the S state is necessary to reproduce XFEL results within 0.16 Å.
光系统II的锰钙氧簇在光合作用产氧过程中推动了关键步骤,即水裂解反应。最近通过飞秒X射线自由电子激光(XFEL)测量解析了科克-乔利奥循环S态下该簇的结构。然而,XFEL结果的特点是与先前的X射线衍射(XRD)以及基于从头计算的S模型存在明显差异。我们在此基于一组结合了S态和S态的基于密度泛函理论(DFT)的结构以及分子动力学模拟,给出了一个统一的图景。我们的研究结果表明,不能基于单一结构来解释XFEL结果。需要两种S稳定异构体以及S态的少量贡献相结合,才能在0.16埃范围内重现XFEL结果。