AlShareef Sahar, Ling Yu, Butt Haroon, Mariappan Kiruthiga G, Benhamed Moussa, Mahfouz Magdy M
Laboratory for Genome Engineering, Division of Biological Sciences, 4700 King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia.
BMC Genomics. 2017 Mar 27;18(1):260. doi: 10.1186/s12864-017-3656-z.
Constitutive and alternative splicing of pre-mRNAs from multiexonic genes controls the diversity of the proteome; these precisely regulated processes also fine-tune responses to cues related to growth, development, and stresses. Small-molecule inhibitors that perturb splicing provide invaluable tools for use as chemical probes to uncover the molecular underpinnings of splicing regulation and as potential anticancer compounds.
Here, we show that herboxidiene (GEX1A) inhibits both constitutive and alternative splicing. Moreover, GEX1A activates genome-wide transcriptional patterns involved in abiotic stress responses in plants. GEX1A treatment -activated ABA-inducible promoters, and led to stomatal closure. Interestingly, GEX1A and pladienolide B (PB) elicited similar cellular changes, including alterations in the patterns of transcription and splicing, suggesting that these compounds might target the same spliceosome complex in plant cells.
Our study establishes GEX1A as a potent splicing inhibitor in plants that can be used to probe the assembly, dynamics, and molecular functions of the spliceosome and to study the interplay between splicing stress and abiotic stresses, as well as having potential biotechnological applications.
多外显子基因前体mRNA的组成型剪接和可变剪接控制着蛋白质组的多样性;这些精确调控的过程还能微调对与生长、发育和胁迫相关信号的反应。扰乱剪接的小分子抑制剂为用作化学探针以揭示剪接调控的分子基础以及作为潜在抗癌化合物提供了宝贵工具。
在此,我们表明赫博昔地因(GEX1A)抑制组成型剪接和可变剪接。此外,GEX1A激活了植物中非生物胁迫反应中涉及的全基因组转录模式。GEX1A处理激活了脱落酸诱导型启动子,并导致气孔关闭。有趣的是,GEX1A和普拉地诺内酯B(PB)引发了相似的细胞变化,包括转录和剪接模式的改变,这表明这些化合物可能靶向植物细胞中的同一剪接体复合物。
我们的研究确定GEX1A是一种有效的植物剪接抑制剂,可用于探究剪接体的组装、动态变化和分子功能,研究剪接胁迫与非生物胁迫之间的相互作用,以及具有潜在的生物技术应用。