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酵母线粒体中的RNA剪接:细胞色素c氧化酶亚基I基因的内含子aI1和aI2切除缺陷的mit-突变体的DNA序列分析

RNA splicing in yeast mitochondria: DNA sequence analysis of mit- mutants deficient in the excision of introns aI1 and aI2 of the gene for subunit I of cytochrome c oxidase.

作者信息

van der Veen R, de Haan M, Grivell L A

机构信息

Section for Molecular Biology, University of Amsterdam, Amsterdam, The Netherlands.

出版信息

Curr Genet. 1988 Mar;13(3):219-26. doi: 10.1007/BF00387767.

DOI:10.1007/BF00387767
PMID:2838183
Abstract

We have characterized two yeast mutants deficient in the splicing of transcripts of the mitochondrial gene for cytochrome c oxidase subunit I (coxI). Both map to the first intron (aI1). RNA blot analysis shows that in addition to a reduced (mutant M15-190) or blocked (mutant M12-193) excision of the mutated intron aI1, the mutants are unable to excise the adjacent aI2 intron, the reading frame of which displays an amino acid sequence similarity to aI1. Splicing of the downstream introns is not affected, however. Sequence analysis of the first mutant DNA (M12-193) reveals a premature termination of the intron-encoded open reading frame, followed by two alterations at a short distance downstream. The other (M15-190) contains 11 separate changes. Although these occur in the intron reading frame, their main effect on RNA splicing may be exerted through the disturbance of intron secondary structure proposed for the 5' end of several group II introns. The implications of these findings in relation to maturase function and structure of intron aI1 are discussed.

摘要

我们已经鉴定出两个酵母突变体,它们在细胞色素c氧化酶亚基I(coxI)线粒体基因转录本的剪接方面存在缺陷。这两个突变体都定位于第一个内含子(aI1)。RNA印迹分析表明,除了突变的内含子aI1的切除减少(突变体M15 - 190)或受阻(突变体M12 - 193)外,这些突变体还无法切除相邻的aI2内含子,其阅读框显示出与aI1的氨基酸序列相似性。然而,下游内含子的剪接不受影响。对第一个突变体DNA(M12 - 193)的序列分析揭示了内含子编码的开放阅读框的提前终止,随后在下游短距离处有两个改变。另一个(M15 - 190)包含11个单独的变化。尽管这些变化发生在内含子阅读框中,但它们对RNA剪接的主要影响可能是通过干扰为几个II类内含子5'端提出的内含子二级结构来实现的。讨论了这些发现与成熟酶功能和内含子aI1结构的关系。

相似文献

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RNA splicing in yeast mitochondria: DNA sequence analysis of mit- mutants deficient in the excision of introns aI1 and aI2 of the gene for subunit I of cytochrome c oxidase.酵母线粒体中的RNA剪接:细胞色素c氧化酶亚基I基因的内含子aI1和aI2切除缺陷的mit-突变体的DNA序列分析
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引用本文的文献

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Nucleic Acids Res. 1992 Dec 11;20(23):6339-46. doi: 10.1093/nar/20.23.6339.
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The identification of 18 nuclear genes required for the expression of the yeast mitochondrial gene encoding cytochrome c oxidase subunit 1.

本文引用的文献

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Mitochondrial mutagenesis in Saccharomyces cerevisiae : V. Frequencies of different mit (-) mutants and loss of their mit (+) alleles in rho (-) clones.酵母线粒体突变:V. rho(-)克隆中不同的mit(-)突变体的频率及其 mit(+)等位基因的丢失。
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RNA processing in yeast mitochondria: characterization of mit(-) mutants disturbed in the synthesis of subunit I of cytochrome c oxidase.酵母线粒体中的 RNA 加工:亚基 I 细胞色素 c 氧化酶合成受干扰的 mit(-) 突变体的特征。
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鉴定酵母线粒体基因表达所需的18个核基因,该线粒体基因编码细胞色素c氧化酶亚基1。
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4
Sequence of introns and flanking exons in wild-type and box3 mutants of cytochrome b reveals an interlaced splicing protein coded by an intron.细胞色素b野生型和box3突变体中内含子及侧翼外显子的序列揭示了一个由内含子编码的交错剪接蛋白。
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Mutations affecting RNA splicing and the interaction of gene expression of the yeast mitochondrial loci cob and oxi-3.影响酵母线粒体基因座cob和oxi - 3的RNA剪接及基因表达相互作用的突变
Cell. 1980 May;20(1):173-83. doi: 10.1016/0092-8674(80)90245-7.
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Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure.真菌线粒体内含子的比较揭示了RNA二级结构中广泛的同源性。
Biochimie. 1982 Oct;64(10):867-81. doi: 10.1016/s0300-9084(82)80349-0.
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Making ends meet: a model for RNA splicing in fungal mitochondria.收支平衡:真菌线粒体中RNA剪接的一种模型。
Nature. 1982 Dec 23;300(5894):719-24. doi: 10.1038/300719a0.
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Functional domains in introns: trans-acting and cis-acting regions of intron 4 of the cob gene.内含子中的功能结构域:cob基因第4内含子的反式作用和顺式作用区域
Cell. 1982 Oct;30(3):925-32. doi: 10.1016/0092-8674(82)90297-5.
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Processing of yeast mitochondrial RNA: involvement of intramolecular hybrids in splicing of cob intron 4 RNA by mutation and reversion.酵母线粒体RNA的加工:通过突变和回复突变研究分子内杂交体在细胞色素b氧化酶亚基1内含子4 RNA剪接中的作用
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