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三种非典型、无感染性、无效分离株的基因组序列永久草案。

Permanent Draft Genome Sequences of Three sp. Strains That Are Atypical, Noninfective, Ineffective Isolates.

作者信息

Gueddou Abdellatif, Swanson Erik, Ktari Amir, Nouioui Imen, Hezbri Karima, Ghodhbane-Gtari Faten, Simpson Stephen, Morris Krystalynne, Thomas W Kelley, Sen Arnab, Gtari Maher, Tisa Louis S

机构信息

Université de Tunis El Manar, Tunis, Tunisia.

University of New Hampshire, Durham, New Hampshire, USA.

出版信息

Genome Announc. 2017 Apr 13;5(15):e00174-17. doi: 10.1128/genomeA.00174-17.

DOI:10.1128/genomeA.00174-17
PMID:28408685
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5391423/
Abstract

Here, we present draft genome sequences for three atypical strains (lineage 4) that were isolated from root nodules but are unable to reinfect actinorhizal plants. The genome sizes of sp. strains EUN1h, BMG5.36, and NRRL B16386 were 9.91, 11.20, and 9.43 Mbp, respectively.

摘要

在此，我们展示了从根瘤中分离出的三株非典型菌株（谱系4）的基因组序列草图，这些菌株无法再次感染放线菌根植物。sp. 菌株EUN1h、BMG5.36和NRRL B16386的基因组大小分别为9.91、11.20和9.43 Mbp。

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本文引用的文献

1
antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters.antiSMASH 3.0——用于生物合成基因簇基因组挖掘的综合资源。
Nucleic Acids Res. 2015 Jul 1;43(W1):W237-43. doi: 10.1093/nar/gkv437. Epub 2015 May 6.
2
Expanding our understanding of sequence-function relationships of type II polyketide biosynthetic gene clusters: bioinformatics-guided identification of Frankiamicin A from Frankia sp. EAN1pec.拓展我们对II型聚酮生物合成基因簇序列-功能关系的理解：基于生物信息学从Frankia sp. EAN1pec中鉴定出弗兰基霉素A。
PLoS One. 2015 Apr 2;10(4):e0121505. doi: 10.1371/journal.pone.0121505. eCollection 2015.
3
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
4
Evolutionary dynamics of nitrogen fixation in the legume-rhizobia symbiosis.豆科植物-根瘤菌共生体系中固氮作用的进化动力学
PLoS One. 2014 Apr 1;9(4):e93670. doi: 10.1371/journal.pone.0093670. eCollection 2014.
5
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products.从嵌合MDA产物中组装单细胞基因组和微型宏基因组。
J Comput Biol. 2013 Oct;20(10):714-37. doi: 10.1089/cmb.2013.0084.
6
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Nucleic Acids Res. 2011 Jul;39(Web Server issue):W339-46. doi: 10.1093/nar/gkr466. Epub 2011 Jun 14.
7
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9
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Pharmacogenomics. 2004 Jun;5(4):433-8. doi: 10.1517/14622416.5.4.433.
10
Assessing the phylogeny of Frankia-actinorhizal plant nitrogen-fixing root nodule symbioses with Frankia 16S rRNA and glutamine synthetase gene sequences.利用弗兰克氏菌16S rRNA和谷氨酰胺合成酶基因序列评估弗兰克氏菌与放线菌根植物固氮根瘤共生关系的系统发育。
Mol Phylogenet Evol. 2004 Apr;31(1):131-8. doi: 10.1016/j.ympev.2003.08.001.