• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

IS150:一种新型大肠杆菌插入元件的分布、核苷酸序列及系统发育关系

IS150: distribution, nucleotide sequence and phylogenetic relationships of a new E. coli insertion element.

作者信息

Schwartz E, Kröger M, Rak B

机构信息

Institut für Biologie III, Universität Freiburg, FRG.

出版信息

Nucleic Acids Res. 1988 Jul 25;16(14B):6789-802. doi: 10.1093/nar/16.14.6789.

DOI:10.1093/nar/16.14.6789
PMID:2841644
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC338333/
Abstract

Recently we identified the new insertion (IS) sequence IS150 in various strains of Escherichia coli K-12. We have screened other strains of E. coli and Salmonella typhimurium for the presence of homologous sequences. The strains of E. coli K-12 and W tested contain one or more copies of homology to IS150. We have also determined the complete nucleotide sequence of a copy of IS150 inserted into IS1. Comparison of nucleotide and deduced amino acid sequences of IS150, IS2, IS3, IS51, IS600 and IS629 reveals significant homologies suggesting that these elements are members of a family of phylogenetically related insertion sequences.

摘要

最近,我们在多种大肠杆菌K-12菌株中鉴定出了新的插入序列(IS)IS150。我们筛选了其他大肠杆菌菌株和鼠伤寒沙门氏菌,以检测是否存在同源序列。所测试的大肠杆菌K-12和W菌株含有一个或多个与IS150同源的拷贝。我们还确定了插入到IS1中的一个IS150拷贝的完整核苷酸序列。对IS150、IS2、IS3、IS51、IS600和IS629的核苷酸和推导氨基酸序列进行比较,发现了显著的同源性,这表明这些元件是一个系统发育相关插入序列家族的成员。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9d1/338333/18092d3dfb7f/nar00168-0109-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9d1/338333/18092d3dfb7f/nar00168-0109-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9d1/338333/18092d3dfb7f/nar00168-0109-a.jpg

相似文献

1
IS150: distribution, nucleotide sequence and phylogenetic relationships of a new E. coli insertion element.IS150:一种新型大肠杆菌插入元件的分布、核苷酸序列及系统发育关系
Nucleic Acids Res. 1988 Jul 25;16(14B):6789-802. doi: 10.1093/nar/16.14.6789.
2
Identification, DNA sequence, and distribution of IS981, a new, high-copy-number insertion sequence in lactococci.乳酸乳球菌中新型高拷贝数插入序列IS981的鉴定、DNA序列及分布
Appl Environ Microbiol. 1991 Mar;57(3):734-43. doi: 10.1128/aem.57.3.734-743.1991.
3
IS861, a group B streptococcal insertion sequence related to IS150 and IS3 of Escherichia coli.IS861,一种与大肠杆菌的IS150和IS3相关的B族链球菌插入序列。
J Bacteriol. 1989 Oct;171(10):5531-5. doi: 10.1128/jb.171.10.5531-5535.1989.
4
The ancestry of insertion sequences common to Escherichia coli and Salmonella typhimurium.大肠杆菌和鼠伤寒沙门氏菌共有的插入序列的起源。
J Bacteriol. 1993 Dec;175(24):7863-8. doi: 10.1128/jb.175.24.7863-7868.1993.
5
Natural populations of Escherichia coli and Salmonella typhimurium harbor the same classes of insertion sequences.大肠杆菌和鼠伤寒沙门氏菌的自然种群含有相同类别的插入序列。
Genetics. 1993 Mar;133(3):449-54. doi: 10.1093/genetics/133.3.449.
6
Comparison of IS1, IS2 and IS3 copy number in Escherichia coli strains K-12, B and C.大肠杆菌K-12、B和C菌株中IS1、IS2和IS3拷贝数的比较
Gene. 1981 Dec;16(1-3):161-70. doi: 10.1016/0378-1119(81)90072-x.
7
Four types of IS1 with differences in nucleotide sequence reside in the Escherichia coli K-12 chromosome.四种核苷酸序列存在差异的IS1位于大肠杆菌K-12染色体中。
Gene. 1991 Feb 1;98(1):1-5. doi: 10.1016/0378-1119(91)90096-t.
8
Genetic organization of insertion element IS2 based on a revised nucleotide sequence.基于修正核苷酸序列的插入元件IS2的基因组织。
Gene. 1987;59(2-3):291-6. doi: 10.1016/0378-1119(87)90337-4.
9
Second-element turn-on of gene expression in an IS1 insertion mutant.IS1插入突变体中基因表达的第二元件开启
Mol Gen Genet. 1988 Feb;211(2):282-9. doi: 10.1007/BF00330605.
10
E. coli ribosomal RNA contains sequences homologous to insertion sequences IS1 and IS2.大肠杆菌核糖体RNA含有与插入序列IS1和IS2同源的序列。
Nature. 1979;282(5741):872-4. doi: 10.1038/282872a0.

引用本文的文献

1
Promoter recruitment drives the emergence of proto-genes in a long-term evolution experiment with Escherichia coli.启动子招募驱动大肠杆菌长期进化实验中原始基因的出现。
PLoS Biol. 2024 May 7;22(5):e3002418. doi: 10.1371/journal.pbio.3002418. eCollection 2024 May.
2
CRISPR-interference-based modulation of mobile genetic elements in bacteria.基于CRISPR干扰对细菌中移动遗传元件的调控
Synth Biol (Oxf). 2019;4(1):ysz008. doi: 10.1093/synbio/ysz008. Epub 2019 Mar 15.
3
Genetic basis of evolutionary adaptation by Escherichia coli to stressful cycles of freezing, thawing and growth.

本文引用的文献

1
Insertion sequence elements of Pseudomonas savastanoi: Nucleotide sequence and homology with Agrobacterium tumefaciens transfer DNA.假单胞菌 savastanoi 的插入序列元件:核苷酸序列与根癌农杆菌转移 DNA 的同源性。
Proc Natl Acad Sci U S A. 1986 Nov;83(21):8263-7. doi: 10.1073/pnas.83.21.8263.
2
IS2 insertion is a major cause of spontaneous mutagenesis of the bacteriophage P1: non-random distribution of target sites.IS2插入是噬菌体P1自发诱变的主要原因:靶位点的非随机分布。
EMBO J. 1983;2(1):67-71. doi: 10.1002/j.1460-2075.1983.tb01382.x.
3
Method to determine the reading frame of a protein from the purine/pyrimidine genome sequence and its possible evolutionary justification.
大肠杆菌对冷冻、解冻和生长压力循环的进化适应的遗传基础。
Genetics. 2008 Sep;180(1):431-43. doi: 10.1534/genetics.108.091330. Epub 2008 Aug 30.
4
Bacterial repetitive extragenic palindromic sequences are DNA targets for Insertion Sequence elements.细菌重复基因外回文序列是插入序列元件的DNA靶点。
BMC Genomics. 2006 Mar 24;7:62. doi: 10.1186/1471-2164-7-62.
5
Horizontal transfer of CS1 pilin genes of enterotoxigenic Escherichia coli.产肠毒素大肠杆菌CS1菌毛蛋白基因的水平转移
J Bacteriol. 2004 May;186(10):3230-7. doi: 10.1128/JB.186.10.3230-3237.2004.
6
Escherichia coli insertion sequence IS150: transposition via circular and linear intermediates.大肠杆菌插入序列IS150:通过环状和线性中间体进行转座
J Bacteriol. 2002 Nov;184(21):5833-41. doi: 10.1128/JB.184.21.5833-5841.2002.
7
Reactivation of insertionally inactivated Shiga toxin 2 genes of Escherichia coli O157:H7 caused by nonreplicative transposition of the insertion sequence.由插入序列的非复制性转座导致大肠杆菌O157:H7的志贺毒素2基因插入失活的重新激活。
Appl Environ Microbiol. 2000 Mar;66(3):1133-8. doi: 10.1128/AEM.66.3.1133-1138.2000.
8
Direct selection of IS903 transposon insertions by use of a broad-host-range vector: isolation of catalase-deficient mutants of Actinobacillus actinomycetemcomitans.利用广宿主范围载体直接选择IS903转座子插入:放线共生放线杆菌过氧化氢酶缺陷型突变体的分离
J Bacteriol. 1999 Dec;181(23):7298-307. doi: 10.1128/JB.181.23.7298-7307.1999.
9
Characterization of insertions of IS476 and two newly identified insertion sequences, IS1478 and IS1479, in Xanthomonas campestris pv. campestris.野油菜黄单胞菌野油菜致病变种中IS476以及两个新鉴定的插入序列IS1478和IS1479插入情况的特征分析
J Bacteriol. 1999 Feb;181(4):1220-8. doi: 10.1128/JB.181.4.1220-1228.1999.
10
Insertion sequences.插入序列
Microbiol Mol Biol Rev. 1998 Sep;62(3):725-74. doi: 10.1128/MMBR.62.3.725-774.1998.
从嘌呤/嘧啶基因组序列确定蛋白质阅读框的方法及其可能的进化依据。
Proc Natl Acad Sci U S A. 1981 Mar;78(3):1596-600. doi: 10.1073/pnas.78.3.1596.
4
Simplified computer programs for search of homology within nucleotide sequences.用于搜索核苷酸序列同源性的简化计算机程序。
Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):193-201. doi: 10.1093/nar/12.1part1.193.
5
Insertion element IS5 contains a third gene.插入元件IS5含有第三个基因。
EMBO J. 1984 Apr;3(4):807-11. doi: 10.1002/j.1460-2075.1984.tb01889.x.
6
A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.一种将DNA限制性内切酶片段放射性标记至高比活度的技术。
Anal Biochem. 1983 Jul 1;132(1):6-13. doi: 10.1016/0003-2697(83)90418-9.
7
IS3 can function as a mobile promoter in E. coli.IS3在大肠杆菌中可作为移动启动子发挥作用。
Nucleic Acids Res. 1982 Oct 11;10(19):5935-48. doi: 10.1093/nar/10.19.5935.
8
Expression of two proteins from overlapping and oppositely oriented genes on transposable DNA insertion element IS5.转座DNA插入元件IS5上重叠且方向相反的基因所表达的两种蛋白质
Nature. 1982 May 13;297(5862):124-8. doi: 10.1038/297124a0.
9
Transposable elements in prokaryotes.原核生物中的转座元件。
Annu Rev Genet. 1981;15:341-404. doi: 10.1146/annurev.ge.15.120181.002013.
10
Genesis and natural history of IS-mediated transposons.插入序列介导的转座子的起源与自然史。
Cold Spring Harb Symp Quant Biol. 1981;45 Pt 1:27-43. doi: 10.1101/sqb.1981.045.01.006.