Suppr超能文献

p53动态指导TFIID在靶基因启动子上的组装。

p53 Dynamically Directs TFIID Assembly on Target Gene Promoters.

作者信息

Coleman R A, Qiao Z, Singh S K, Peng C S, Cianfrocco M, Zhang Z, Piasecka A, Aldeborgh H, Basishvili G, Liu W L

机构信息

Gruss Lipper Biophotonics Center, Department of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, New York, USA

Gruss Lipper Biophotonics Center, Department of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, New York, USA.

出版信息

Mol Cell Biol. 2017 Jun 15;37(13). doi: 10.1128/MCB.00085-17. Print 2017 Jul 1.

Abstract

p53 is a central regulator that turns on vast gene networks to maintain cellular integrity in the presence of various stimuli. p53 activates transcription initiation in part by aiding recruitment of TFIID to the promoter. However, the precise means by which p53 dynamically interacts with TFIID to facilitate assembly on target gene promoters remains elusive. To address this key issue, we have undertaken an integrated approach involving single-molecule fluorescence microscopy, single-particle cryo-electron microscopy, and biochemistry. Our real-time single-molecule imaging data demonstrate that TFIID alone binds poorly to native p53 target promoters. p53 unlocks TFIID's ability to bind DNA by stabilizing TFIID contacts with both the core promoter and a region within p53's response element. Analysis of single-molecule dissociation kinetics reveals that TFIID interacts with promoters via transient and prolonged DNA binding modes that are each regulated by p53. Importantly, our structural work reveals that TFIID's conversion to a rearranged DNA binding conformation is enhanced in the presence of DNA and p53. Notably, TFIID's interaction with DNA induces p53 to rapidly dissociate, which likely leads to additional rounds of p53-mediated recruitment of other basal factors. Collectively, these findings indicate that p53 dynamically escorts and loads TFIID onto its target promoters.

摘要

p53是一种核心调节因子,在存在各种刺激的情况下,它会开启大量基因网络以维持细胞完整性。p53部分通过协助将TFIID招募到启动子上来激活转录起始。然而,p53与TFIID动态相互作用以促进在靶基因启动子上组装的确切方式仍然难以捉摸。为了解决这个关键问题,我们采用了一种综合方法,包括单分子荧光显微镜、单颗粒冷冻电子显微镜和生物化学。我们的实时单分子成像数据表明,单独的TFIID与天然p53靶启动子结合不佳。p53通过稳定TFIID与核心启动子以及p53反应元件内一个区域的接触来释放TFIID结合DNA的能力。对单分子解离动力学的分析表明,TFIID通过瞬时和延长的DNA结合模式与启动子相互作用,每种模式都受p53调节。重要的是,我们的结构研究表明,在存在DNA和p53的情况下,TFIID向重排的DNA结合构象的转变会增强。值得注意的是,TFIID与DNA的相互作用会诱导p53迅速解离,这可能会导致p53介导的其他基础因子的额外轮次招募。总的来说,这些发现表明p53动态护送并将TFIID加载到其靶启动子上。

相似文献

6
Structural dynamics and DNA interaction of human TFIID.人类TFIID的结构动力学与DNA相互作用
Transcription. 2017 Jan;8(1):55-60. doi: 10.1080/21541264.2016.1265701. Epub 2016 Dec 9.
7
Promoter Recognition: Putting TFIID on the Spot.启动子识别:将 TFIID 置于聚光灯下。
Trends Cell Biol. 2019 Sep;29(9):752-763. doi: 10.1016/j.tcb.2019.06.004. Epub 2019 Jul 9.

引用本文的文献

3
Interaction modules that impart specificity to disordered protein.赋予无序蛋白特异性的相互作用模块。
Trends Biochem Sci. 2023 May;48(5):477-490. doi: 10.1016/j.tibs.2023.01.004. Epub 2023 Feb 6.
4
Imaging Organization of RNA Processing within the Nucleus.RNA 加工在细胞核内的成像组织。
Cold Spring Harb Perspect Biol. 2021 Dec 1;13(12):a039453. doi: 10.1101/cshperspect.a039453.
5
Structure of the p53/RNA polymerase II assembly.p53/RNA 聚合酶 II 组装结构。
Commun Biol. 2021 Mar 25;4(1):397. doi: 10.1038/s42003-021-01934-4.
6
What do Transcription Factors Interact With?转录因子与什么相互作用?
J Mol Biol. 2021 Jul 9;433(14):166883. doi: 10.1016/j.jmb.2021.166883. Epub 2021 Feb 20.

本文引用的文献

1
Structural visualization of the p53/RNA polymerase II assembly.p53/RNA聚合酶II组装体的结构可视化
Genes Dev. 2016 Nov 15;30(22):2527-2537. doi: 10.1101/gad.285692.116. Epub 2016 Dec 5.
7
8
Unravelling mechanisms of p53-mediated tumour suppression.揭示 p53 介导的肿瘤抑制机制。
Nat Rev Cancer. 2014 May;14(5):359-70. doi: 10.1038/nrc3711. Epub 2014 Apr 17.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验