Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Villa Comunale 1, Naples, 80121, Italy.
Earlham Institute, Norwich Research Park, Norwich, NR4 7UG, UK.
New Phytol. 2017 Jul;215(1):140-156. doi: 10.1111/nph.14557. Epub 2017 Apr 21.
Microalgae play a major role as primary producers in aquatic ecosystems. Cell signalling regulates their interactions with the environment and other organisms, yet this process in phytoplankton is poorly defined. Using the marine planktonic diatom Pseudo-nitzschia multistriata, we investigated the cell response to cues released during sexual reproduction, an event that demands strong regulatory mechanisms and impacts on population dynamics. We sequenced the genome of P. multistriata and performed phylogenomic and transcriptomic analyses, which allowed the definition of gene gains and losses, horizontal gene transfers, conservation and evolutionary rate of sex-related genes. We also identified a small number of conserved noncoding elements. Sexual reproduction impacted on cell cycle progression and induced an asymmetric response of the opposite mating types. G protein-coupled receptors and cyclic guanosine monophosphate (cGMP) are implicated in the response to sexual cues, which overall entails a modulation of cell cycle, meiosis-related and nutrient transporter genes, suggesting a fine control of nutrient uptake even under nutrient-replete conditions. The controllable life cycle and the genome sequence of P. multistriata allow the reconstruction of changes occurring in diatoms in a key phase of their life cycle, providing hints on the evolution and putative function of their genes and empowering studies on sexual reproduction.
微藻在水生生态系统中作为初级生产者起着重要作用。细胞信号转导调节它们与环境和其他生物体的相互作用,但浮游植物中的这一过程尚未得到明确界定。本研究使用海洋浮游硅藻多纹拟菱形藻,研究了细胞对有性生殖过程中释放的信号的反应,这一事件需要强大的调节机制,并影响种群动态。我们对多纹拟菱形藻的基因组进行了测序,并进行了系统发生和转录组分析,这使得能够定义基因的获得和丧失、水平基因转移、与性相关基因的保守和进化率。我们还鉴定了少数保守的非编码元件。有性生殖影响细胞周期进程,并诱导相反交配型的不对称反应。G 蛋白偶联受体和环鸟苷酸 (cGMP) 参与对性信号的反应,总体上涉及细胞周期、减数分裂相关和营养转运蛋白基因的调节,表明即使在营养充足的条件下,也能对营养吸收进行精细控制。多纹拟菱形藻的可控制生命周期和基因组序列允许重建其生命周期关键阶段中硅藻发生的变化,为其基因的进化和可能功能提供线索,并为有性生殖研究提供支持。