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从台湾患病花鳗鲡养殖池中分离出的一种水生双RNA病毒的全基因组序列及系统发育分析

Complete genome sequence and phylogenetic analyses of an aquabirnavirus isolated from a diseased marbled eel culture in Taiwan.

作者信息

Wen Chiu-Ming

机构信息

Department of Life Sciences, National University of Kaohsiung, No. 700, Kaohsiung University Road, Nan-Tzu District, Kaohsiung, 81148, Taiwan.

出版信息

Arch Virol. 2017 Aug;162(8):2467-2471. doi: 10.1007/s00705-017-3382-5. Epub 2017 Apr 24.

DOI:10.1007/s00705-017-3382-5
PMID:28439709
Abstract

An aquabirnavirus was isolated from diseased marbled eels (Anguilla marmorata; MEIPNV1310) with gill haemorrhages and associated mortality. Its genome segment sequences were obtained through next-generation sequencing and compared with published aquabirnavirus sequences. The results indicated that the genome sequence of MEIPNV1310 contains segment A (3099 nucleotides) and segment B (2789 nucleotides). Phylogenetic analysis showed that MEIPNV1310 is closely related to the infectious pancreatic necrosis Ab strain within genogroup II. This genome sequence is beneficial for studying the geographic distribution and evolution of aquabirnaviruses.

摘要

从患有鳃出血并伴有死亡的患病花鳗鲡(Anguilla marmorata;MEIPNV1310)中分离出一种水生双RNA病毒。通过下一代测序获得其基因组片段序列,并与已发表的水生双RNA病毒序列进行比较。结果表明,MEIPNV1310的基因组序列包含A片段(3099个核苷酸)和B片段(2789个核苷酸)。系统发育分析表明,MEIPNV1310与基因II型中的传染性胰腺坏死Ab株密切相关。该基因组序列有助于研究水生双RNA病毒的地理分布和进化。

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