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通过对一种药用植物自然变异化学型的NGS转录组和代谢中间体分析解析胡黄连苷II生物合成的模块化设计

Modular Design of Picroside-II Biosynthesis Deciphered through NGS Transcriptomes and Metabolic Intermediates Analysis in Naturally Variant Chemotypes of a Medicinal Herb, .

作者信息

Kumar Varun, Bansal Ankush, Chauhan Rajinder S

机构信息

Department of Biotechnology and Bioinformatics, Jaypee University of Information TechnologyWaknaghat, India.

出版信息

Front Plant Sci. 2017 Apr 11;8:564. doi: 10.3389/fpls.2017.00564. eCollection 2017.

DOI:10.3389/fpls.2017.00564
PMID:28443130
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5387076/
Abstract

Picroside-II (P-II), an iridoid glycoside, is used as an active ingredient of various commercial herbal formulations available for the treatment of liver ailments. Despite this, the knowledge of P-II biosynthesis remains scarce owing to its negligence in shoots which sets constant barrier for function validation experiments. In this study, we utilized natural variation for P-II content in stolon tissues of different accessions and deciphered its metabolic route by integrating metabolomics of intermediates with differential NGS transcriptomes. Upon navigating through high vs. low P-II content accessions (1.3-2.6%), we have established that P-II is biosynthesized degradation of ferulic acid (FA) to produce vanillic acid (VA) which acts as its immediate biosynthetic precursor. Moreover, the FA treatment at 150 μM concentration provided further confirmation with 2-fold rise in VA content. Interestingly, the cross-talk between different compartments of , i.e., shoots and stolons, resolved spatial complexity of P-II biosynthesis and consequently speculated the burgeoning necessity to bridge gap between VA and P-II production in shoots. This work thus, offers a forward looking strategy to produce both P-I and P-II in shoot cultures, a step toward providing a sustainable production platform for these medicinal compounds via-à-vis relieving pressure from natural habitat of .

摘要

獐牙菜苦苷-II(P-II)是一种环烯醚萜苷,用作多种市售草药制剂的活性成分,可用于治疗肝脏疾病。尽管如此,由于其在芽中的含量可忽略不计,这给功能验证实验带来了持续的障碍,因此关于P-II生物合成的知识仍然匮乏。在本研究中,我们利用不同种质匍匐茎组织中P-II含量的自然变异,通过将中间体代谢组学与差异NGS转录组相结合来解析其代谢途径。在筛选高P-II含量与低P-II含量的种质(1.3 - 2.6%)后,我们确定P-II是由阿魏酸(FA)降解产生香草酸(VA)后生物合成的,VA是其直接的生物合成前体。此外,150 μM浓度的FA处理使VA含量提高了2倍,进一步证实了这一点。有趣的是,不同部位(即芽和匍匐茎)之间的相互作用解决了P-II生物合成的空间复杂性,因此推测迫切需要弥合芽中VA和P-II生产之间的差距。因此,这项工作提供了一种前瞻性策略,即在芽培养中生产P-I和P-II,这是朝着通过减轻[具体植物名称]自然栖息地的压力,为这些药用化合物提供可持续生产平台迈出的一步。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/433d740ae43f/fpls-08-00564-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/07fc7f75a28d/fpls-08-00564-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/fd4d593cb061/fpls-08-00564-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/9dfb1a1758c6/fpls-08-00564-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/433d740ae43f/fpls-08-00564-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/07fc7f75a28d/fpls-08-00564-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/539a3efde17b/fpls-08-00564-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/1f2b838beadc/fpls-08-00564-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/b12186d5cd09/fpls-08-00564-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/b41660411e9c/fpls-08-00564-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/fd4d593cb061/fpls-08-00564-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/9dfb1a1758c6/fpls-08-00564-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a8c/5387076/433d740ae43f/fpls-08-00564-g008.jpg

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